RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 DGCR6LQ9BY27 220 aa10.8□□□□□ -0.68
USP1-203ENST00000442679 CLEC4MQ9H2X3 399 aaPredicted RBP10.8□□□□□ -0.68
USP1-203ENST00000442679 OR52D1Q9H346 318 aa10.8□□□□□ -0.68
USP1-203ENST00000442679 NRIP3Q9NQ35 241 aa10.8□□□□□ -0.68
USP1-203ENST00000442679 PDP1Q9P0J1 537 aaPredicted RBP10.8□□□□□ -0.68
USP1-203ENST00000442679 AMDHD2Q9Y303 409 aa10.8□□□□□ -0.68
USP1-203ENST00000442679 IER3IP1Q9Y5U9 82 aa10.8□□□□□ -0.68
USP1-203ENST00000442679 FREM1Q5H8C1 2179 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 TEX13CA0A0J9YWL9 993 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.79□□□□□ -0.68
USP1-203ENST00000442679 CYSRT1A8MQ03 144 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 XKRYO14609 159 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 SEC14L2O76054 403 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 PPP1R3DO95685 299 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 GSTM3P21266 225 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 FASP25445 335 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ZNF83P51522 516 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ZNF84P51523 738 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 RPS6KA3P51812 740 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ARHGDIAP52565 204 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 NR1H2P55055 460 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 GABPB1Q06547 395 aaPredicted RBP10.79□□□□□ -0.68
USP1-203ENST00000442679 CD47Q08722 323 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ATP6AP1Q15904 470 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 THEM4Q5T1C6 240 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 C1QTNF12Q5T7M4 302 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 SEZ6L2Q6UXD5 910 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ZNF813Q6ZN06 617 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ZNF620Q6ZNG0 422 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 RASSF6Q6ZTQ3 369 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 FAM122BQ7Z309 247 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 CDC20BQ86Y33 519 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 RASD2Q96D21 266 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ERMAPQ96PL5 475 aaPredicted RBP10.79□□□□□ -0.68
USP1-203ENST00000442679 IFT27Q9BW83 186 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 NELFAQ9H3P2 528 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 ESRP2Q9H6T0 727 aaKnown RBP10.79□□□□□ -0.68
USP1-203ENST00000442679 EGLN3Q9H6Z9 239 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 NTN4Q9HB63 628 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 OBP2BQ9NPH6 170 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 NPAP1Q9NZP6 1156 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 CDH10Q9Y6N8 788 aa10.79□□□□□ -0.68
USP1-203ENST00000442679 PKDREJQ9NTG1 2253 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 ARPC4-TTLL3A0A0A6YYG9 625 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 ARRDC5A6NEK1 342 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 DPRXA6NFQ7 191 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 IMPA2O14732 288 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 SLC2A10O95528 541 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 TXNDC12O95881 172 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 FCGR1AP12314 374 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 NR2C1P13056 603 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 APEHP13798 732 aaKnown RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 B4GALT1P15291 398 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 PRKACGP22612 351 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 LOXP28300 417 aaPredicted RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 SDHAP31040 664 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 CAPZA2P47755 286 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 ZNF133P52736 654 aaPredicted RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 TUBA1BP68363 451 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 TUBA4AP68366 448 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 FMODQ06828 376 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 COX10Q12887 443 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 KRR1Q13601 381 aaKnown RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 NCMAPQ5T1S8 102 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 C10orf128Q5T292 105 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 RPL13AP3Q6NVV1 102 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 SHQ1Q6PI26 577 aaKnown RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 KLHL17Q6TDP4 642 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 CD300LDQ6UXZ3 194 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 TUBA1AQ71U36 451 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 ZNF627Q7L945 461 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 CCDC36Q8IYA8 594 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 C10orf67Q8IYJ2 551 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 HS3ST5Q8IZT8 346 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 CLDN22Q8N7P3 220 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 FNDC8Q8TC99 324 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 PYDC1Q8WXC3 89 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 LRTOMTQ8WZ04 291 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 NSMAFQ92636 917 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 NMD3Q96D46 503 aaKnown RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 LURAP1Q96LR2 239 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 HS3ST6Q96QI5 342 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 FOXB1Q99853 325 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 NIPSNAP1Q9BPW8 284 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 DENND2DQ9H6A0 471 aaPredicted RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 SMURF2Q9HAU4 748 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 IL20Q9NYY1 176 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 MAGED1Q9Y5V3 778 aaPredicted RBP10.78□□□□□ -0.68
USP1-203ENST00000442679 APCP25054 2843 aa10.78□□□□□ -0.68
USP1-203ENST00000442679 ITPR2Q14571 2701 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 IGKV1D-43A0A0B4J1Z2 117 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 SLC22A23A1A5C7 686 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 H7C1C5 153 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 M0R1B8 84 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 SOCS2O14508 198 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 ARPC3O15145 178 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 IDH3BO43837 385 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 AHCYL1O43865 530 aa10.77□□□□□ -0.69
USP1-203ENST00000442679 CD3EP07766 207 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms