RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 SNHG12Q9BXW3 62 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 GPR62Q9BZJ7 368 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SMOC1Q9H4F8 434 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 NSUN3Q9H649 340 aaKnown RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 NDOR1Q9UHB4 597 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ASB1Q9Y576 335 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 MST1RQ04912 1400 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 MYH1P12882 1939 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 A0A1W2PRS3 328 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 HS3ST1O14792 307 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 P2RX6O15547 441 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 XRCC2O43543 280 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 GBAP04062 536 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ZNF140P52738 457 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TAS2R50P59544 299 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SP4Q02446 784 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SQSTM1Q13501 440 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 IAH1Q2TAA2 248 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SPATA45Q537H7 98 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 RNFT1Q5M7Z0 435 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 FIGLAQ6QHK4 219 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TBPL2Q6SJ96 375 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ZNF429Q86V71 674 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CPOQ8IVL8 374 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TCEAL8Q8IYN2 117 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 C17orf78Q8N4C9 275 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 EID2Q8N6I1 236 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TEX29Q8N6K0 151 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 FAM181AQ8N9Y4 354 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 OR4L1Q8NH43 312 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ASB10Q8WXI3 467 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 POM121L2Q96KW2 1035 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TMPRSS13Q9BYE2 586 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ULBP3Q9BZM4 244 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 OR51I2Q9H344 312 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TAS2R5Q9NYW4 299 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 LAMTOR2Q9Y2Q5 125 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 BCORL1Q5H9F3 1711 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TNFSF15O95150 251 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 C1RP00736 705 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CSTBP04080 98 aaKnown RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ESDP10768 282 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 PRSS3P35030 304 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SLC6A11P48066 632 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CAV2P51636 162 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 DNAJB13P59910 316 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 HLA-BQ31612 363 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ITPRIPL2Q3MIP1 535 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SDHAF4Q5VUM1 108 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TMEM107Q6UX40 140 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 LHFPL4Q7Z7J7 247 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 ZBTB34Q8NCN2 500 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 OR9A4Q8NGU2 314 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 OR6K6Q8NGW6 343 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CNN2Q99439 309 aaKnown RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 NAA11Q9BSU3 229 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 NTMQ9P121 344 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 SLC23A2Q9UGH3 650 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 FOXD3Q9UJU5 478 aaPredicted RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CARHSP1Q9Y2V2 147 aaKnown RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 CCL27Q9Y4X3 112 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 STYXL1Q9Y6J8 313 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 BCL9O00512 1426 aa5.16□□□□□ -1.58
PTPRC-209ENST00000442510 URB2Q14146 1524 aaKnown RBP5.16□□□□□ -1.58
PTPRC-209ENST00000442510 TBC1D3BA6NDS4 549 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 J3QLW9 94 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 FOXO3O43524 673 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ECI2O75521 394 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 C22orf31O95567 290 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 SLC25A27O95847 323 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ZNF19P17023 458 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 AOAHP28039 575 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 EPHA8P29322 1005 aaPredicted RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 GABRA5P31644 462 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 OR1D2P34982 312 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ROM1Q03395 351 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ZP2Q05996 745 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ACSM2AQ08AH3 577 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 SRSF6Q13247 344 aaKnown RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 GSG1Q2KHT4 349 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 TBC1D3GQ6DHY5 549 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 RPL22L1Q6P5R6 122 aaKnown RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 DRAM2Q6UX65 266 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 NPNTQ6UXI9 565 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 TMEM183AQ8IXX5 376 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 OR6T1Q8NGN1 323 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 RAB40AQ8WXH6 277 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 TMEM106AQ96A25 262 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 COA7Q96BR5 231 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 ZNF75AQ96N20 296 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 NKX3-1Q99801 234 aaPredicted RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 RUSC1Q9BVN2 902 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 PARP12Q9H0J9 701 aaKnown RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 OR10A5Q9H207 317 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 OR52D1Q9H346 318 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 SLC32A1Q9H598 525 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 DNMT3BQ9UBC3 853 aaKnown RBP5.15□□□□□ -1.58
PTPRC-209ENST00000442510 CLN8Q9UBY8 286 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 USP31Q70CQ4 1352 aa5.15□□□□□ -1.58
PTPRC-209ENST00000442510 TRAV26-1A0A087WT03 109 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms