RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NOVA1P51513 510 aaKnown RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 PSMD7P51665 324 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ALKBH1Q13686 389 aaKnown RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 EIF2B1Q14232 305 aaKnown RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 ZNF181Q2M3W8 571 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TRIM16LQ309B1 348 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MS4A18Q3C1V0 323 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ACSM3Q53FZ2 586 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 HSD17B12Q53GQ0 312 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 YIF1BQ5BJH7 314 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 B3GNTL1Q67FW5 361 aaPredicted RBP5.41□□□□□ -1.54
VPS50-205ENST00000441602 VASNQ6EMK4 673 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 IGF2-ASQ6U949 168 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR6V1Q8N148 313 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ZNF676Q8N7Q3 588 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 PRSS33Q8NF86 280 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OR6X1Q8NH79 312 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 OTOSQ8NHW6 89 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 NKD1Q969G9 470 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 DNAJA3Q96EY1 480 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 PELI1Q96FA3 418 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 ZNF649Q9BS31 505 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 MRI1Q9BV20 369 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 CCDC32Q9BV29 185 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 TPK1Q9H3S4 243 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 HEATR5AQ86XA9 2040 aa5.41□□□□□ -1.54
VPS50-205ENST00000441602 IGLV1-36A0A0B4J1U3 117 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 A0A1W2PNR3 127 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TMEM212A6NML5 194 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 SHISA8B8ZZ34 492 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 G3V3Y1 287 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ZNF593O00488 134 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 SYNGR4O95473 234 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 LALBAP00709 142 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 OR8G3PP0DMU2 310 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 BMP4P12644 408 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ENPP1P22413 925 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 CSNK1A1P48729 337 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ZNF84P51523 738 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TAF13Q15543 124 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 SOWAHCQ53LP3 525 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 ESPNLQ6ZVH7 1005 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 GPAT4Q86UL3 456 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 GLB1L2Q8IW92 636 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 MEIOBQ8N635 442 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 OR5AK2Q8NH90 309 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ZPLD1Q8TCW7 415 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 GHSRQ92847 366 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 SLC25A44Q96H78 314 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 WDFY2Q96P53 400 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 OR8B4Q96RC9 309 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 SF3B5Q9BWJ5 86 aaKnown RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 NIPAL2Q9H841 368 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 RABL2AQ9UBK7 228 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 ST6GALNAC2Q9UJ37 374 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 RABL2BQ9UNT1 228 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TRAV1-2A0A0B4J238 106 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 PMS2P1A4D2B8 440 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 FAM25AB3EWG3 89 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 FAM25CB3EWG5 89 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 FAM25GB3EWG6 89 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 J3QRK9 145 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TERTO14746 1132 aaKnown RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 RPP14O95059 124 aaKnown RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 CD2P06729 351 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ALOX5APP20292 161 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 PTBP1P26599 531 aaKnown RBP eCLIP5.4□□□□□ -1.546e-18■■■■■ 65.1
VPS50-205ENST00000441602 TCF15Q12870 199 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 OR1C1Q15619 314 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TEX30Q5JUR7 227 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 AGAP7PQ5VUJ5 663 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 DEGS2Q6QHC5 323 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 METAP1DQ6UB28 335 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 DPY19L4Q7Z388 723 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 TMEM178AQ8NBL3 297 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 OR2V1Q8NHB1 315 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 AGAP4Q96P64 663 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 GNRHR2Q96P88 292 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TSSK2Q96PF2 358 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 KCNK17Q96T54 332 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 TSPAN10Q9H1Z9 355 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 RNF167Q9H6Y7 350 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 PAQR5Q9NXK6 330 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 QPCTLQ9NXS2 382 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 DAPK2Q9UIK4 370 aa5.4□□□□□ -1.54
VPS50-205ENST00000441602 COA3Q9Y2R0 106 aaPredicted RBP5.4□□□□□ -1.54
VPS50-205ENST00000441602 A0A1W2PPL8 197 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 AQP8O94778 261 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 H2BFMP0C1H6 154 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 LAP3P28838 519 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 TGFBR1P36897 503 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 INPP1P49441 399 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 CCR9P51686 369 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 RAC3P60763 192 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 Q0VFX4 171 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 POU4F3Q15319 338 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 HBMQ6B0K9 141 aa5.4□□□□□ -1.55
VPS50-205ENST00000441602 SLC25A25Q6KCM7 469 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms