RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 VASPP50552 380 aaPredicted RBP18.45■□□□□ 0.54
SHOX2-203ENST00000441443 NR0B2Q15466 257 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 ANKRD16Q6P6B7 361 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 SLC16A13Q7RTY0 426 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 CLEC1AQ8NC01 280 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 PPP1R1CQ8WVI7 109 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 KXD1Q9BQD3 176 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 SDK1Q7Z5N4 2213 aa18.45■□□□□ 0.54
SHOX2-203ENST00000441443 ALPK2Q86TB3 2170 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 ITGB2P05107 769 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 CSN2P05814 226 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 NFYBP25208 207 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 CSF2RBP32927 897 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 EXOSC7Q15024 291 aaKnown RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 MICBQ29980 383 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 FBXO46Q6PJ61 603 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 UQCC3Q6UW78 93 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 TMEFF1Q8IYR6 380 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 RXFP4Q8TDU9 374 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 TMEM106AQ96A25 262 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 TINAGL1Q9GZM7 467 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 PLEKHA6Q9Y2H5 1048 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 NOP16Q9Y3C1 178 aaKnown RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR2F2O95006 317 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 KAT7O95251 611 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 ACAA1P09110 424 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 RPS27P42677 84 aaKnown RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 POU3F4P49335 361 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR2F1Q13607 317 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 PDGFRLQ15198 375 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 PRRT3Q5FWE3 981 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 DHRS7BQ6IAN0 325 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 GABRG1Q8N1C3 465 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR52E1Q8NGJ3 308 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 RPS4Y2Q8TD47 263 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 MRPL48Q96GC5 212 aaKnown RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 RSPH9Q9H1X1 276 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 GAREM1Q9H706 876 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 ZNF860A6NHJ4 632 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 LRRC72A6NJI9 287 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR2AT4A6NND4 320 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 LDB3O75112 727 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 GABRA3P34903 492 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 EMDP50402 254 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 CAPZA1P52907 286 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 ALKBH1Q13686 389 aaKnown RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR7A5Q15622 319 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 PLEKHN1Q494U1 663 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-203ENST00000441443 ARMC10Q8N2F6 343 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 GALNT16Q8N428 558 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 OR5M8Q8NGP6 311 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 CCDC107Q8WV48 283 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 SFXN1Q9H9B4 322 aa18.44■□□□□ 0.54
SHOX2-203ENST00000441443 CD8AP01732 235 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 GJA4P35212 333 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 PSMD4P55036 377 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 DEFB134Q4QY38 66 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 CCDC74AQ96AQ1 378 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 C1orf198Q9H425 327 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 C14orf105Q9NVL8 296 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 MRM2Q9UI43 246 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 ENTPD2Q9Y5L3 495 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 RAB19A4D1S5 217 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 SGCEO43556 437 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 PRICKLE3O43900 615 aaPredicted RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 RAB3DO95716 219 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 AMY2AP04746 511 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 CBR1P16152 277 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 CD34P28906 385 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 PEBP1P30086 187 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 DHRS2Q13268 280 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 SMAD2Q15796 467 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 SCGB2B2Q4G0G5 96 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 ADAD1Q96M93 576 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 ALG12Q9BV10 488 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 ZMAT3Q9HA38 289 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 RXFP3Q9NSD7 469 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 IKZF2Q9UKS7 526 aa18.43■□□□□ 0.54
SHOX2-203ENST00000441443 FARSAQ9Y285 508 aaKnown RBP18.43■□□□□ 0.54
SHOX2-203ENST00000441443 LOC100509620A0A075B734 347 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 MEX3AA1L020 520 aaKnown RBP18.42■□□□□ 0.54
SHOX2-203ENST00000441443 ALOX12BO75342 701 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 UPK3AO75631 287 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 CSRP1P21291 193 aaKnown RBP18.42■□□□□ 0.54
SHOX2-203ENST00000441443 DRD3P35462 400 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 PDZK1IP1Q13113 114 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 C2orf27AQ580R0 203 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 ZNF684Q5T5D7 378 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 AVPI1Q5T686 147 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 ARHGAP40Q5TG30 622 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 FAM220AQ7Z4H9 259 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 YAF2Q8IY57 180 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 TREM1Q9NP99 234 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 VCANP13611 3396 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 WNT11O96014 354 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 LEG1Q6P5S2 330 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 ENPP7Q6UWV6 458 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 ACOT7LQ6ZUV0 252 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 LMF1Q96S06 567 aa18.42■□□□□ 0.54
SHOX2-203ENST00000441443 MYADMQ96S97 322 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms