RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 DGCR6Q14129 220 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 FXNQ16595 210 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 ZBED5Q49AG3 693 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 MTX3Q5HYI7 312 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 FGD3Q5JSP0 725 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 TMEM53Q6P2H8 277 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 LRFN4Q6PJG9 635 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 NOXO1Q8NFA2 376 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 MOSPD2Q8NHP6 518 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 BCAS4Q8TDM0 211 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 MCHR2Q969V1 340 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 TNFRSF13CQ96RJ3 184 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 ZNF347Q96SE7 839 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 ALG12Q9BV10 488 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 MUC13Q9H3R2 512 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 MAN2C1Q9NTJ4 1040 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 NDUFAF4Q9P032 175 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 ZNF346Q9UL40 294 aaKnown RBP9.11□□□□□ -0.95
MCF2L-216ENST00000439475 TMCC3Q9ULS5 477 aa9.11□□□□□ -0.95
MCF2L-216ENST00000439475 POLQO75417 2590 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 B9A039 149 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 hCG_2039718K7EN88 272 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 ARPC2O15144 300 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PDE5AO76074 875 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PRSS23O95084 383 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 CD8AP01732 235 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 HLA-HP01893 362 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 FABP3P05413 133 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 INHBBP09529 407 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 MAKP20794 623 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 MSX2P35548 267 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PTDSS1P48651 473 aaKnown RBP9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SNRPD2P62316 118 aaKnown RBP9.1□□□□□ -0.95
MCF2L-216ENST00000439475 GALK2Q01415 458 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SPIBQ01892 262 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PLP2Q04941 152 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 CD47Q08722 323 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 HIST3H3Q16695 136 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 CLEC12BQ2HXU8 276 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 THEM4Q5T1C6 240 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 ARMC4Q5T2S8 1044 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PODNL1Q6PEZ8 512 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 TBPL2Q6SJ96 375 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 B3GLCTQ6Y288 498 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SLC16A14Q7RTX9 510 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 BIVMQ86UB2 503 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SLC22A24Q8N4F4 322 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SYT14Q8NB59 555 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 NUP37Q8NFH4 326 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 OR1J2Q8NGS2 313 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SLC7A13Q8TCU3 470 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 FBXO17Q96EF6 278 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 C7orf34Q96L11 122 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 CACNG6Q9BXT2 260 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 MRPL13Q9BYD1 178 aaKnown RBP9.1□□□□□ -0.95
MCF2L-216ENST00000439475 LRMDAQ9H2I8 198 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 C1orf198Q9H425 327 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 SMURF2Q9HAU4 748 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 CA10Q9NS85 328 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 B3GNT2Q9NY97 397 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 ACTR3BQ9P1U1 418 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 GRHPRQ9UBQ7 328 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 PRPF19Q9UMS4 504 aaKnown RBP9.1□□□□□ -0.95
MCF2L-216ENST00000439475 V9GYQ6 96 aa9.1□□□□□ -0.95
MCF2L-216ENST00000439475 USF3Q68DE3 2245 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 TRAV27A0A087WT01 109 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 IQCMA0A1B0GVH7 501 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 SLC22A23A1A5C7 686 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 XKRYO14609 159 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 AHCYL1O43865 530 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 KRT36O76013 467 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 NDUFB2O95178 105 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 IGHMP01871 453 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 SERPINA5P05154 406 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 CD14P08571 375 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 SERPINF1P36955 418 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 GPR4P46093 362 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 GIPRP48546 466 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 ZNF133P52736 654 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-216ENST00000439475 DSCR9P59020 149 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 LSM11P83369 360 aaKnown RBP eCLIP9.09□□□□□ -0.95
MCF2L-216ENST00000439475 VLDLRP98155 873 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 MYBPC1Q00872 1141 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 TOP3AQ13472 1001 aaPredicted RBP9.09□□□□□ -0.95
MCF2L-216ENST00000439475 DAG1Q14118 895 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 C10orf128Q5T292 105 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 VHLLQ6RSH7 139 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 DHFR2Q86XF0 187 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 KRTAP1-3Q8IUG1 177 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 SKA3Q8IX90 412 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 LINC00471Q8N535 108 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 ARIH2OSQ8N7S6 290 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 LRRC75AQ8NAA5 344 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 RBM15BQ8NDT2 890 aaKnown RBP9.09□□□□□ -0.95
MCF2L-216ENST00000439475 OR4K5Q8NGD3 323 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 OR52J3Q8NH60 311 aa9.09□□□□□ -0.95
MCF2L-216ENST00000439475 HDAC2Q92769 488 aaKnown RBP9.09□□□□□ -0.95
MCF2L-216ENST00000439475 LRGUKQ96M69 825 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms