RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 HIP1O00291 1037 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CCL21O00585 134 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 HDAC3O15379 428 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 B4GALT5O43286 388 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SHOX2O60902 331 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 TBL1XO60907 577 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SERF1AO75920 110 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 LYPD3O95274 346 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CA1P00915 261 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OPN1LWP04000 364 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ALOX5P09917 674 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 DRD5P21918 477 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 RGRP47804 291 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CCL7P80098 99 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ELP6Q0PNE2 266 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SNTB2Q13425 540 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CAPRIN1Q14444 709 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 LAGE3Q14657 143 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SYCP1Q15431 976 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 PRR4Q16378 134 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 KYAT1Q16773 422 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 TIGITQ495A1 244 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR2B11Q5JQS5 317 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 RIPPLY2Q5TAB7 128 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SDHAF4Q5VUM1 108 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ATL3Q6DD88 541 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CD300LGQ6UXG3 332 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 TPGS1Q6ZTW0 290 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF589Q86UQ0 364 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 MTURNQ8N3F0 131 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR5L2Q8NGL0 311 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR2T34Q8NGX1 318 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SGMS2Q8NHU3 365 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SPPL2BQ8TCT7 592 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 LMX1AQ8TE12 382 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 THRSPQ92748 146 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OSTF1Q92882 214 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SYAP1Q96A49 352 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OTUB2Q96DC9 234 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZMYND19Q96E35 227 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 RBMXL1Q96E39 390 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 DTNBP1Q96EV8 351 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 PHYHIPLQ96FC7 376 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 RMND5BQ96G75 393 aaPredicted RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 C16orf74Q96GX8 76 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 TTC25Q96NG3 672 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC6A7Q99884 636 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 OMDQ99983 421 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 BBS2Q9BXC9 721 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 DUSP16Q9BY84 665 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 CHIAQ9BZP6 476 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 PPDPFQ9H3Y8 114 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF702PQ9H963 129 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 PDFQ9HBH1 243 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 FARSBQ9NSD9 589 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 FBXL12Q9NXK8 326 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 GNG12Q9UBI6 72 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 UBQLN1Q9UMX0 589 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 GSTK1Q9Y2Q3 226 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 MRPS18BQ9Y676 258 aaKnown RBP2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 MAD1L1Q9Y6D9 718 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 U3KQA8 63 aa2.31□□□□□ -2.04
HMGB3P12-201ENST00000438745 MEGF8Q7Z7M0 2845 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 LOC100131303A0A0U1RQF7 123 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 A0A1B0GUA9 196 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 GSAPA4D1B5 854 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CASC3O15234 703 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 MSH4O15457 936 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZSCAN12O43309 604 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 AQP9O43315 295 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 NOL3O60936 208 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 MFN2O95140 757 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 IGHV3-23P01764 117 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 KRT6AP02538 564 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 STSP08842 583 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 GIMD1P0DJR0 217 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CALM1P0DP23 149 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CALM2P0DP24 149 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CALM3P0DP25 149 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CCL4P13236 92 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CPN1P15169 458 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 HMGA1P17096 107 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZP3P21754 424 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 UQCRC2P22695 453 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 HTR2AP28223 471 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 HNRNPH3P31942 346 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CASP14P31944 242 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 HPCAL1P37235 193 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 PLA2G16P53816 162 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 DMTNQ08495 405 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 MXD4Q14582 209 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 AANATQ16613 207 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TPD52L1Q16890 204 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC5A12Q1EHB4 618 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 RABGAP1LQ5R372 815 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 FAM199XQ6PEV8 388 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TFAP2EQ6VUC0 442 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 HSD17B13Q7Z5P4 300 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TMEM179BQ7Z7N9 219 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TMEM25Q86YD3 366 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms