RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 C7orf34Q96L11 122 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 SEPHS2Q99611 448 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 MRPL13Q9BYD1 178 aaKnown RBP21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 NDEL1Q9GZM8 345 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 FBXL3Q9UKT7 428 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 ZNF503-AS2A6NEH8 195 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 ARPC2O15144 300 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 TRMUO75648 421 aaKnown RBP21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 OR8G3PP0DMU2 310 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 NRN1LQ496H8 165 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 FGD3Q5JSP0 725 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 ARMC4Q5T2S8 1044 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 FAM205BPQ63HN1 556 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 TMPRSS11FQ6ZWK6 438 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 ARHGAP24Q8N264 748 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 SLC22A24Q8N4F4 322 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 FAM86B1Q8N7N1 296 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 OR51A7Q8NH64 312 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 SLC7A13Q8TCU3 470 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 MCHR2Q969V1 340 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 MCUR1Q96AQ8 359 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 ZNF347Q96SE7 839 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 CACNG6Q9BXT2 260 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 KRCC1Q9NPI7 259 aaPredicted RBP21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 CA10Q9NS85 328 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 TMEM38BQ9NVV0 291 aa21.49■■□□□ 1.03
RAPGEF1-206ENST00000438647 B2RBV5 119 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 hCG_2039718K7EN88 272 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 RAB36O95755 333 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 IGHMP01871 453 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 CELA3BP08861 270 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 INHBBP09529 407 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 CALB2P22676 271 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 VLDLRP98155 873 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 RUNX1T1Q06455 604 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 BIVMQ86UB2 503 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 SYT14Q8NB59 555 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 FAM53CQ9NYF3 392 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 ADAM21Q9UKJ8 722 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 V9GYQ6 96 aa21.48■■□□□ 1.03
RAPGEF1-206ENST00000438647 TRAV27A0A087WT01 109 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 VSTM5A8MXK1 200 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 MGRN1O60291 552 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 PDE5AO76074 875 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 MSX2P35548 267 aaPredicted RBP21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 GPR4P46093 362 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 PTDSS1P48651 473 aaKnown RBP21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 SMIM11AP58511 58 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 CTXN1P60606 82 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 RPL27P61353 136 aaKnown RBP21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 RAB1AP62820 205 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 PIGFQ07326 219 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 TOP3AQ13472 1001 aaPredicted RBP21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 PODNL1Q6PEZ8 512 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 TBPL2Q6SJ96 375 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 DPPA2Q7Z7J5 298 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 NUP37Q8NFH4 326 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 OR13C2Q8NGS9 318 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 FNDC8Q8TC99 324 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 SEC61A2Q9H9S3 476 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 SMURF2Q9HAU4 748 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 PMF1-BGLAPU3KQ54 211 aa21.47■■□□□ 1.03
RAPGEF1-206ENST00000438647 IGHV2OR16-5A0A0B4J2B6 119 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 FAM171A2A8MVW0 826 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 H7C1Q1 480 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 CALCRP30988 508 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 ZNF133P52736 654 aaPredicted RBP21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 CD47Q08722 323 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 CLEC12BQ2HXU8 276 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 C10orf128Q5T292 105 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 MYPOPQ86VE0 399 aaPredicted RBP21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 MEX3DQ86XN8 651 aaKnown RBP21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 COX4I2Q96KJ9 171 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 TNFRSF13CQ96RJ3 184 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 ALG12Q9BV10 488 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 ZNF224Q9NZL3 707 aa21.46■■□□□ 1.03
RAPGEF1-206ENST00000438647 TRIM64A6NGJ6 449 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 TRIM64BA6NI03 449 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 A6NIZ1 184 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 H7C417 338 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 IGHV4-39P01824 125 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 SEMG1P04279 462 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 GIPRP48546 466 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 RAP1BP61224 184 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 RAP1AP62834 184 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 MYBPC1Q00872 1141 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 RAB35Q15286 201 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZBED5Q49AG3 693 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 SKA3Q8IX90 412 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 LRRC75AQ8NAA5 344 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 HDAC2Q92769 488 aaKnown RBP21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 FBXO17Q96EF6 278 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 DHRS1Q96LJ7 313 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 KCNK17Q96T54 332 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZNF442Q9H7R0 627 aa21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZNF346Q9UL40 294 aaKnown RBP21.45■■□□□ 1.02
RAPGEF1-206ENST00000438647 CDC42EP2O14613 210 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 DIRAS1O95057 198 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 FABP3P05413 133 aa21.44■■□□□ 1.02
RAPGEF1-206ENST00000438647 ZNF14P17017 642 aaPredicted RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms