RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CCDC167Q9P0B6 97 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 SLC7A8Q9UHI5 535 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 DUSP13Q9UII6 198 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 RAB21Q9UL25 225 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 CHST2Q9Y4C5 530 aa6.69□□□□□ -1.34
VPS50-204ENST00000438395 ARFGEF3Q5TH69 2177 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 A0A0B4J2E0 115 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 A0A1B0GX12 115 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 SLC22A23A1A5C7 686 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ZNF503-AS2A6NEH8 195 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 PLPP3O14495 311 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ANGPT2O15123 496 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 RNF13O43567 381 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 FMO6PO60774 539 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 FZD7O75084 574 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 HPRP00739 348 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 BGLAPP02818 100 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 OR8G3PP0DMU2 310 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 HLA-DOBP13765 273 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 TCN1P20061 433 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 DRD4P21917 467 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ACHEP22303 614 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 GLRXP35754 106 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ZNF84P51523 738 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 DVL1P1P54792 670 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 AQP5P55064 265 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 CDH12P55289 794 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 BIDP55957 195 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 KLF3P57682 345 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 ACTG1P63261 375 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 RIN1Q13671 783 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MAD2L1BPQ15013 274 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 TRIP10Q15642 601 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 AGKQ53H12 422 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 LRIF1Q5T3J3 769 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 RGS7BPQ6MZT1 257 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 ZNF613Q6PF04 617 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 EPGNQ6UW88 154 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 C12orf54Q6X4T0 127 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 PIWIL3Q7Z3Z3 882 aaKnown RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 NANOGNBQ7Z5D8 188 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 PXKQ7Z7A4 578 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 DPPA2Q7Z7J5 298 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 SMYD1Q8NB12 490 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ICA1LQ8NDH6 482 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 OR5J2Q8NH18 312 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 OR51F2Q8NH61 342 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ZNF418Q8TF45 676 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 RDH5Q92781 318 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 ZNF566Q969W8 418 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 SLC41A3Q96GZ6 507 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 C7orf26Q96N11 449 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MOGAT1Q96PD6 335 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MCHR1Q99705 422 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MRPL37Q9BZE1 423 aaKnown RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 TMEM38AQ9H6F2 299 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 METTL17Q9H7H0 456 aaPredicted RBP6.68□□□□□ -1.34
VPS50-204ENST00000438395 LPAR2Q9HBW0 351 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 NANSQ9NR45 359 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 SLC25A37Q9NYZ2 338 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 FZR1Q9UM11 496 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MALRD1Q5VYJ5 2156 aa6.68□□□□□ -1.34
VPS50-204ENST00000438395 MGAM2Q2M2H8 2515 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 IQCMA0A1B0GVH7 501 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 CPSF4LA6NMK7 179 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 LYNX1G3V0Z9 82 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MS4A18H0YCH9 400 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 M0R3H8 397 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 KPNA4O00629 521 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 CHP2O43745 196 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TPST1O60507 370 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 PTHP01270 115 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 IGHG1P01857 330 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SERPINA5P05154 406 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 LCKP06239 509 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MSMBP08118 114 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 LYNX1P0DP58 116 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 ZNF14P17017 642 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 ITGA2P17301 1181 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 CD247P20963 164 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 IL2RGP31785 369 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MRPL19P49406 292 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 TMEM33P57088 247 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 CLRN1P58418 232 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MRPS11P82912 194 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 TEKQ02763 1124 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 HSF2Q03933 536 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 RBBP4Q09028 425 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 RAB39AQ14964 217 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MOGQ16653 247 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 TBC1D28Q2M2D7 210 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 MS4A18Q3C1V0 323 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 PCGF3Q3KNV8 242 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLC36A2Q495M3 483 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 PHYHD1Q5SRE7 291 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 INTS11Q5TA45 600 aaKnown RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 TTC33Q6PID6 262 aaPredicted RBP6.67□□□□□ -1.34
VPS50-204ENST00000438395 UNQ6126/PRO20091Q6UXV3 157 aa6.67□□□□□ -1.34
VPS50-204ENST00000438395 SLC35D2Q76EJ3 337 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms