RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 MRPL58Q14197 206 aaKnown RBP14.59□□□□□ -0.07
PTPN13-204ENST00000436978 DHRS4L2Q6PKH6 230 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 OR7G2Q8NG99 324 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 ZNF419Q96HQ0 510 aaPredicted RBP14.59□□□□□ -0.07
PTPN13-204ENST00000436978 PLCXD1Q9NUJ7 323 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 NID1P14543 1247 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 FGFBP1Q14512 234 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 RPS19BP1Q86WX3 136 aaKnown RBP14.59□□□□□ -0.07
PTPN13-204ENST00000436978 PELI3Q8N2H9 469 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 RBMXL3Q8N7X1 1067 aaKnown RBP14.59□□□□□ -0.07
PTPN13-204ENST00000436978 TEX19Q8NA77 164 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 LGALS14Q8TCE9 139 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 DAPP1Q9UN19 280 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 BTBD17A6NE02 478 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 LGI1O95970 557 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 ZNF74Q16587 644 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 OR52N1Q8NH53 320 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 SLAMF9Q96A28 289 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.59□□□□□ -0.07
PTPN13-204ENST00000436978 TLE4Q04727 773 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 SCGB2A2Q13296 93 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 BCORP1Q8N888 145 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 CHST8Q9H2A9 424 aa14.59□□□□□ -0.07
PTPN13-204ENST00000436978 ARHGAP33O14559 1287 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 CSO75390 466 aaKnown RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 BLVRBP30043 206 aaPredicted RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 EPHA5P54756 1037 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 SMAD2Q15796 467 aaKnown RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 ATPAF1Q5TC12 328 aaPredicted RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 MRGPRX1Q96LB2 322 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 UHRF2Q96PU4 802 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 SSX4O60224 188 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 IDH3GP51553 393 aaPredicted RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 HMGN3Q15651 99 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 FCRL6Q6DN72 434 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 GDPD3Q7L5L3 318 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 ZNF583Q96ND8 569 aa14.58□□□□□ -0.07
PTPN13-204ENST00000436978 C19orf53Q9UNZ5 99 aaPredicted RBP14.58□□□□□ -0.07
PTPN13-204ENST00000436978 PRKRAO75569 313 aaKnown RBP14.58□□□□□ -0.08
PTPN13-204ENST00000436978 UBL3O95164 117 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 DCXRQ7Z4W1 244 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF546Q86UE3 836 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 AMBRA1Q9C0C7 1298 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 LAT2Q9GZY6 243 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 GPATCH2Q9NW75 528 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 DEGS1O15121 323 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 TPOP07202 933 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 RPS25P62851 125 aaKnown RBP14.58□□□□□ -0.08
PTPN13-204ENST00000436978 RUNX2Q13950 521 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 ENTHD1Q8IYW4 607 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF687Q8N1G0 1237 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 SERTAD4Q9NUC0 356 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 A0A087WV62 115 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 OR8G1Q15617 311 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 LCN10Q6JVE6 187 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 LYPD4Q6UWN0 246 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 DOK3Q7L591 496 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 KIAA1958Q8N8K9 716 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 PFN4Q8NHR9 129 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 G3V3Y1 287 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 ACVR1Q04771 509 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 ST8SIA1Q92185 356 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 RPS10P5Q9NQ39 176 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 TACR1P25103 407 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 SNCAP37840 140 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 SNRPD2P62316 118 aaKnown RBP14.58□□□□□ -0.08
PTPN13-204ENST00000436978 KDM4DQ6B0I6 523 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 SEMA6DQ8NFY4 1073 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 OLIG1Q8TAK6 271 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 KIRREL1Q96J84 757 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 IER2Q9BTL4 223 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 CXCL16Q9H2A7 254 aa14.58□□□□□ -0.08
PTPN13-204ENST00000436978 FAM212BQ9NTI7 297 aaPredicted RBP14.58□□□□□ -0.08
PTPN13-204ENST00000436978 TXNL4BQ9NX01 149 aaKnown RBP14.58□□□□□ -0.08
PTPN13-204ENST00000436978 MYO7AQ13402 2215 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 FABP1P07148 127 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 ZNF728P0DKX0 622 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 KCNAB1Q14722 419 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TATDN3Q17R31 274 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 Q6ZNB5 142 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 GATA6Q92908 595 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TMEM265A0A087WTH1 108 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SULT1B1O43704 296 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CD22P20273 847 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 TNFSF8P32971 234 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SELENBP1Q13228 472 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 AARDQ4LEZ3 155 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 XKR7Q5GH72 579 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 SGCEO43556 437 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 IGLV3-25P01717 112 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HBE1P02100 147 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 HOXB5P09067 269 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A6P0DMU7 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A5P0DMU8 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A7P0DMV0 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A8P0DMV1 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 CT45A9P0DMV2 189 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 DEFA4P12838 97 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 GPX2P18283 190 aa14.57□□□□□ -0.08
PTPN13-204ENST00000436978 DUSP8Q13202 625 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms