RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 LAMTOR5O43504 91 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 EIF4E2O60573 245 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 PRAMEF2O60811 474 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 SLC2A10O95528 541 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF735P0CB33 412 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 UBBP0CG47 229 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 UBCP0CG48 685 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 CLUP10909 449 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 MGMTP16455 207 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 DRD5P21918 477 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 DPP4P27487 766 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 FASLGP48023 281 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 PTH2RP49190 550 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 RPS27AP62979 156 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 DCDP81605 110 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 TNFRSF17Q02223 184 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ZNF345Q14585 488 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 CDK5R1Q15078 307 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 CSRP2Q16527 193 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 NRN1LQ496H8 165 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 OR5M10Q6IEU7 315 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 TMEM220Q6QAJ8 160 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ARL9Q6T311 187 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 PRSS55Q6UWB4 352 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 BEND4Q6ZU67 534 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 TMPRSS11FQ6ZWK6 438 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 SYT13Q7L8C5 426 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 LINGO2Q7L985 606 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 TAS1R1Q7RTX1 841 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 AMZ2Q86W34 360 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 NRMQ8IXM6 262 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 CMTM4Q8IZR5 234 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 BHLHE23Q8NDY6 225 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 OR2A12Q8NGT7 310 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 GHSRQ92847 366 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 RAD51AP1Q96B01 352 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 HAVCR1Q96D42 359 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 SLC25A38Q96DW6 304 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 FAM71F1Q96KD3 344 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 C4orf36Q96KX1 117 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ZFP3Q96NJ6 502 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 SLC22A12Q96S37 553 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 MDFIQ99750 246 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 PRSS27Q9BQR3 290 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 AUNIPQ9H7T9 357 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 SLC6A20Q9NP91 592 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 MYOZ1Q9NP98 299 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 EQTNQ9NQ60 294 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ANKRD10Q9NXR5 420 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ICAM5Q9UMF0 924 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 PTRH2Q9Y3E5 179 aaKnown RBP7.34□□□□□ -1.23
VTI1A-202ENST00000432306 ETV7Q9Y603 341 aa7.34□□□□□ -1.23
VTI1A-202ENST00000432306 TCRBV21S2A2A0A5A6 115 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RAB19A4D1S5 217 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 OOEPA6NGQ2 149 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 UNC119BA6NIH7 251 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 A6NIN4 97 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RFPL4AA6NLU0 287 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RFPL4AL1F8VTS6 287 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 ARPC1BO15143 372 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RCBTB2O95199 551 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 CH25HO95992 272 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 HMGN2P05204 90 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 MST1P26927 711 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 NTSP30990 170 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 OR1D2P34982 312 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 AHRP35869 848 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 TSFMP43897 325 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 ATP5IP56385 69 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 PPP2CBP62714 309 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 ACTA2P62736 377 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 ACTG2P63267 376 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 PPP2CAP67775 309 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 SSBP1Q04837 148 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 DMWDQ09019 674 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 SCRN3Q0VDG4 424 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RBMS2Q15434 407 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 LINC00303Q3SY05 128 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 TMEM35AQ53FP2 167 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 RPL22L1Q6P5R6 122 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 DEGS2Q6QHC5 323 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 PGAP1Q75T13 922 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 C17orf64Q86WR6 236 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 TMEM173Q86WV6 379 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 TMEM17Q86X19 198 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 DCUN1D3Q8IWE4 304 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 FAM185AQ8N0U4 392 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 DMBX1Q8NFW5 382 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 OR52L1Q8NGH7 329 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 OR2L2Q8NH16 312 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 SLC22A8Q8TCC7 542 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 LGALS14Q8TCE9 139 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 EXOSC8Q96B26 276 aaKnown RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 IGSF21Q96ID5 467 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 SEC22CQ9BRL7 303 aa7.33□□□□□ -1.24
VTI1A-202ENST00000432306 MS4A7Q9GZW8 240 aaPredicted RBP7.33□□□□□ -1.24
VTI1A-202ENST00000432306 OR52A5Q9H2C5 316 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms