RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 EIF4EP06730 217 aaKnown RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 ZNF28P17035 718 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 KIR2DL3P43628 341 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 NOVA1P51513 510 aaKnown RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 CD300CQ08708 224 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 RASGEF1BQ0VAM2 473 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 SLC25A35Q3KQZ1 300 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 Q499Y3 187 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 SLC25A53Q5H9E4 307 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 FAM205BPQ63HN1 556 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 ZNF57Q68EA5 555 aaPredicted RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 AGBL5Q8NDL9 886 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 OR4M1Q8NGD0 313 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 OTOSQ8NHW6 89 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 THEM6Q8WUY1 208 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 RFT1Q96AA3 541 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 NXPE2Q96DL1 559 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 THAP7Q9BT49 309 aaPredicted RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 WACQ9BTA9 647 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 HDHD2Q9H0R4 259 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 NOX4Q9NPH5 578 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 RYDENQ9NUL5 291 aaKnown RBP11.56□□□□□ -0.56
DDX56-204ENST00000431640 IKZF2Q9UKS7 526 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 LOXL2Q9Y4K0 774 aa11.56□□□□□ -0.56
DDX56-204ENST00000431640 A0A0G2JMP0 313 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 A0A0X1KG70 313 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 FAM240BA0A1B0GVZ2 78 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 A0A1W2PPK0 400 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 TVP23AA6NH52 213 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 TMEM212A6NML5 194 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 FTCDNL1E5RQL4 147 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 H7C1C5 153 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 ZFPL1O95159 310 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 UBL3O95164 117 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 OR8G3PP0DMU2 310 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 FKBP2P26885 142 aaKnown RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 DAP3P51398 398 aaKnown RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 FOXL2P58012 376 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 NANOS3P60323 173 aaKnown RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 LCN6P62502 163 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 CARTPTQ16568 116 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 FDX2Q6P4F2 183 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 KCTD18Q6PI47 426 aaPredicted RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 LYPD4Q6UWN0 246 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 H1FNTQ75WM6 255 aaPredicted RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 DPY19L4Q7Z388 723 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 ZNF454Q8N9F8 522 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 OR4M2Q8NGB6 313 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 ZNF417Q8TAU3 575 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 THAP3Q8WTV1 239 aaPredicted RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 NSMAFQ92636 917 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 LIN37Q96GY3 246 aaPredicted RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 MAP6Q96JE9 813 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 MRGPRX4Q96LA9 322 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 DERL3Q96Q80 235 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 ZNF587Q96SQ5 575 aaPredicted RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 DEFB126Q9BYW3 111 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 BRD7Q9NPI1 651 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 SERINC1Q9NRX5 453 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 DLL3Q9NYJ7 618 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 KLRF1Q9NZS2 232 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 PPP4R1LQ9P1A2 415 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 CAMK2AQ9UQM7 478 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 AK6Q9Y3D8 172 aaKnown RBP11.55□□□□□ -0.56
DDX56-204ENST00000431640 ASPMQ8IZT6 3477 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 MPDZO75970 2070 aa11.55□□□□□ -0.56
DDX56-204ENST00000431640 SLC22A23A1A5C7 686 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 C17orf51A8MQB3 221 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 FAM47E-STBD1D6RA91 191 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 ZNF593O00488 134 aaPredicted RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 SLC16A7O60669 478 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 RPP14O95059 124 aaKnown RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 AKR7A3O95154 331 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 ABHD16AO95870 558 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 HLA-DQA2P01906 255 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 ATF1P18846 271 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 HLA-DMAP28067 261 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 CCR9P51686 369 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 ZNF41P51814 821 aaPredicted RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 MC2RQ01718 297 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 PUDPQ08623 228 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 UBE2NLQ5JXB2 153 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 FAM69BQ5VUD6 431 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 LCN10Q6JVE6 187 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 SLC18B1Q6NT16 456 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 C16orf47Q6ZP98 133 aaPredicted RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 ZNF671Q8TAW3 534 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 DCBLD2Q96PD2 775 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 MMP28Q9H239 520 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 CCDC86Q9H6F5 360 aaKnown RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 AKIRIN1Q9H9L7 192 aaPredicted RBP11.54□□□□□ -0.56
DDX56-204ENST00000431640 TCF7L1Q9HCS4 588 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 B3GAT2Q9NPZ5 323 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 MED11Q9P086 117 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 FRRS1LQ9P0K9 344 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 ZNF221Q9UK13 617 aa11.54□□□□□ -0.56
DDX56-204ENST00000431640 KLHDC2Q9Y2U9 406 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms