RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 IMPA2O14732 288 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 E2F6O75461 281 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 IGHG1P01857 330 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 ANXA8P13928 327 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 PPP3CBP16298 524 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 LOXP28300 417 aaPredicted RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 ACVR1BP36896 505 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 CDKN2AP42771 156 aaKnown RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 ARF1P84077 181 aaKnown RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 DAZAP2Q15038 168 aaPredicted RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 TAB1Q15750 504 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 CEACAM16Q2WEN9 425 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 C9orf135Q5VTT2 229 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 FAM205BPQ63HN1 556 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 GPR139Q6DWJ6 353 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 SLC25A47Q6Q0C1 308 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 PTCHD4Q6ZW05 846 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 C10orf67Q8IYJ2 551 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 C1orf162Q8NEQ5 155 aaPredicted RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 NOXO1Q8NFA2 376 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 STEAP2Q8NFT2 490 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 OR1K1Q8NGR3 316 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 OR4Q3Q8NH05 313 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 FAM222BQ8WU58 562 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 ZNF566Q969W8 418 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 RASD2Q96D21 266 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 BDH2Q9BUT1 245 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 POLDIP3Q9BY77 421 aaKnown RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 SEMA6AQ9H2E6 1030 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 UPB1Q9UBR1 384 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 KCNN3Q9UGI6 736 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 TMEFF2Q9UIK5 374 aaPredicted RBP10.89□□□□□ -0.67
USP40-205ENST00000430158 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
USP40-205ENST00000430158 TEX13CA0A0J9YWL9 993 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SLC22A23A1A5C7 686 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 A6NIZ1 184 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 DHHO43323 396 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 IDH3BO43837 385 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 RAD51DO75771 328 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 PPP1R3DO95685 299 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 QDPRP09417 244 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 EPXP11678 715 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SDHAP31040 664 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SLC6A6P31641 620 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 RPL4P36578 427 aaKnown RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 RAP1BP61224 184 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 RAP1AP62834 184 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 KDM4DQ6B0I6 523 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 RPL13AP3Q6NVV1 102 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 FOXL2NBQ6ZUU3 175 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 HDDC2Q7Z4H3 204 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 ABHD12BQ7Z5M8 362 aaPredicted RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 P2RY8Q86VZ1 359 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 HIPK1Q86Z02 1210 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 PARP8Q8N3A8 854 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SVOPLQ8N434 492 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 LNX2Q8N448 690 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SYT14Q8NB59 555 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 OR6N1Q8NGY5 312 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 MAGEE2Q8TD90 523 aaPredicted RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 USB1Q9BQ65 265 aaKnown RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 SMURF2Q9HAU4 748 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 VSX1Q9NZR4 365 aaPredicted RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
USP40-205ENST00000430158 OAZ3Q9UMX2 235 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 SLC25A15Q9Y619 301 aa10.88□□□□□ -0.67
USP40-205ENST00000430158 PRSS37A4D1T9 235 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 ZNF503-AS2A6NEH8 195 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 DEFB108AA8MXU0 73 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 ZNF99A8MXY4 864 aaPredicted RBP10.87□□□□□ -0.67
USP40-205ENST00000430158 E9PQ18 207 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 G3V2T6 193 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 AHCYL1O43865 530 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 MITFO75030 526 aaPredicted RBP10.87□□□□□ -0.67
USP40-205ENST00000430158 SOX14O95416 240 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 OSMP13725 252 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 COX6B1P14854 86 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
USP40-205ENST00000430158 CRYGSP22914 178 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 IL32P24001 234 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 SH3BGRP55822 239 aaPredicted RBP10.87□□□□□ -0.67
USP40-205ENST00000430158 PPP2R2BQ00005 443 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 MYBPC1Q00872 1141 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 FMODQ06828 376 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 KRR1Q13601 381 aaKnown RBP10.87□□□□□ -0.67
USP40-205ENST00000430158 TBRG1Q3YBR2 411 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 SLC36A3Q495N2 470 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 HIKESHIQ53FT3 197 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 TIMM23BQ5SRD1 257 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 C1QTNF12Q5T7M4 302 aa10.87□□□□□ -0.67
USP40-205ENST00000430158 OR7E24Q6IFN5 339 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms