RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 PKP2Q99959 881 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 MED18Q9BUE0 208 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 NGBQ9NPG2 151 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 VSX1Q9NZR4 365 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-204ENST00000429629 CRIM1Q9NZV1 1036 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 POFUT2Q9Y2G5 429 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 IER3IP1Q9Y5U9 82 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 MAGED1Q9Y5V3 778 aaPredicted RBP13.13□□□□□ -0.31
GARNL3-204ENST00000429629 BAHCC1Q9P281 2608 aa13.13□□□□□ -0.31
GARNL3-204ENST00000429629 ARPC4-TTLL3A0A0A6YYG9 625 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 SLC22A23A1A5C7 686 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 CRYGSP22914 178 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 GIPRP48546 466 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 DAPP51397 102 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-204ENST00000429629 ARF1P84077 181 aaKnown RBP13.12□□□□□ -0.31
GARNL3-204ENST00000429629 LGALS3BPQ08380 585 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 CARD17Q5XLA6 110 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 KDM4DQ6B0I6 523 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 IGFN1Q86VF2 1251 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 HS3ST5Q8IZT8 346 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 PQLC1Q8N2U9 271 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 LINC01560Q8TB33 94 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 ERMAPQ96PL5 475 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-204ENST00000429629 ALKBH3Q96Q83 286 aaPredicted RBP13.12□□□□□ -0.31
GARNL3-204ENST00000429629 IFT27Q9BW83 186 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 TSSK6Q9BXA6 273 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 SLC17A5Q9NRA2 495 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 PAPOLBQ9NRJ5 636 aaKnown RBP13.12□□□□□ -0.31
GARNL3-204ENST00000429629 AMDHD2Q9Y303 409 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 ADAM18Q9Y3Q7 739 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 SLC25A15Q9Y619 301 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
GARNL3-204ENST00000429629 ARHGEF9O43307 516 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 WNT11O96014 354 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 THBDP07204 575 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ZNF23P17027 643 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 NPR2P20594 1047 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 CRABP1P29762 137 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ZNF84P51523 738 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 PPP2R2BQ00005 443 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 KRR1Q13601 381 aaKnown RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 TAB1Q15750 504 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 TBRG1Q3YBR2 411 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 MESTQ5EB52 335 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ZNF362Q5T0B9 420 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 FOXL2NBQ6ZUU3 175 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 C22orf34Q6ZV56 151 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 WDR31Q8NA23 367 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 SYT14Q8NB59 555 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ZNF837Q96EG3 531 aaPredicted RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 FOXB1Q99853 325 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 RBM4BQ9BQ04 359 aaKnown RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 WACQ9BTA9 647 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 EGLN3Q9H6Z9 239 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 OAZ3Q9UMX2 235 aa13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ANKHD1Q8IWZ3 2542 aaKnown RBP13.11□□□□□ -0.31
GARNL3-204ENST00000429629 ASH1LQ9NR48 2969 aaKnown RBP13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TEX13CA0A0J9YWL9 993 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 RAD51DO75771 328 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 PPP1R3DO95685 299 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 HMGN1P05114 100 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 OR8G3PP0DMU2 310 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 NOS3P29474 1203 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 SSTR2P30874 369 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 GRK5P34947 590 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 CDKN2AP42771 156 aaKnown RBP13.1□□□□□ -0.31
GARNL3-204ENST00000429629 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-204ENST00000429629 CDK5Q00535 292 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
GARNL3-204ENST00000429629 PPA1Q15181 289 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 ANKRD34AQ69YU3 496 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 SLC27A4Q6P1M0 643 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 OR8D4Q8NGM9 314 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 DDOQ99489 341 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 PLA2G12AQ9BZM1 189 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 SIAEQ9HAT2 523 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 TMEM38BQ9NVV0 291 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 USE1Q9NZ43 259 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 KIF17Q9P2E2 1029 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 ICE1Q9Y2F5 2266 aa13.1□□□□□ -0.31
GARNL3-204ENST00000429629 DOPEY2Q9Y3R5 2298 aa13.09□□□□□ -0.31
GARNL3-204ENST00000429629 A6NNC1 897 aa13.09□□□□□ -0.31
GARNL3-204ENST00000429629 UTP20O75691 2785 aaKnown RBP13.09□□□□□ -0.31
GARNL3-204ENST00000429629 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
GARNL3-204ENST00000429629 HIST1H1CP16403 213 aaKnown RBP13.09□□□□□ -0.31
GARNL3-204ENST00000429629 COL8A1P27658 744 aa13.09□□□□□ -0.31
GARNL3-204ENST00000429629 HOXC12P31275 282 aa13.09□□□□□ -0.31
GARNL3-204ENST00000429629 CRISP1P54107 249 aa13.09□□□□□ -0.31
GARNL3-204ENST00000429629 NR1H2P55055 460 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms