RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IL6RP08887 468 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 AKR1A1P14550 325 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 HTR1FP30939 366 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 AKT2P31751 481 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 PSEN2P49810 448 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 PRAMEF8Q5VWM4 474 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 PRAMEF7Q5VXH5 474 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 GALNT16Q8N428 558 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR4K17Q8NGC6 315 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 NFKBIDQ8NI38 313 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 UBTD2Q8WUN7 234 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 CMBLQ96DG6 245 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 S100A16Q96FQ6 103 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF514Q96K75 400 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC17A9Q9BYT1 436 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 COMMD4Q9H0A8 199 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC26A1Q9H2B4 701 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 SRMSQ9H3Y6 488 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 SEMA4GQ9NTN9 838 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 SEMA5BQ9P283 1151 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF346Q9UL40 294 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 MYO10Q9HD67 2058 aa8.1□□□□□ -1.11
CDC42BPA-206ENST00000429440 YY2O15391 372 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ZNF208O43345 1280 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 NME6O75414 186 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 PDYNP01213 254 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 IRF2P14316 349 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 AMD1P17707 334 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 BCKDHBP21953 392 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 PDX1P52945 283 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ATP1B3P54709 279 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR7A5Q15622 319 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ACSM3Q53FZ2 586 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 C1orf194Q5T5A4 169 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ATXN7L2Q5T6C5 722 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 KHDRBS2Q5VWX1 349 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 WSCD1Q658N2 575 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR8G2PQ6IF36 304 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 TCTN3Q6NUS6 607 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 LCTLQ6UWM7 567 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SYT12Q8IV01 421 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 TOP6BLQ8N6T0 577 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 FRMD1Q8N878 549 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SIDT2Q8NBJ9 832 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR4K5Q8NGD3 323 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 RCC1LQ96I51 464 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 DPH1Q9BZG8 443 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ISG20L2Q9H9L3 353 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 IL21RQ9HBE5 538 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 NCDNQ9UBB6 729 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR52A1Q9UKL2 312 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 PCYT1BQ9Y5K3 369 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SCN10AQ9Y5Y9 1956 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 A0A087WWC5 75 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 KIR2DL5BA0A0G2JN68 375 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 KIR2DL5BA0A0G2JPC4 375 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 TRBV11-1A0A0K0K1C0 115 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 C20orf202A1L168 122 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 TMEM235A6NFC5 223 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 DCTN6O00399 190 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 PPP1R3DO95685 299 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 MT-ND5P03915 603 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ITGB2P05107 769 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 EPHX1P07099 455 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 CSF1P09603 554 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 CEACAM8P31997 349 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 IGFALSP35858 605 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 PNPLA4P41247 253 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 LPAR6P43657 344 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SULT1A2P50226 295 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 CLDN12P56749 244 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC37A1P57057 533 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 TAS2R19P59542 299 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 FRRS1Q6ZNA5 592 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 BHLHA9Q7RTU4 235 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 KIR2DL5AQ8N109 375 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 C10orf53Q8N6V4 93 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SLC35G3Q8N808 338 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR4C16Q8NGL9 310 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 INTS14Q96SY0 518 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SF3B5Q9BWJ5 86 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 OR8D2Q9GZM6 311 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 RAB33BQ9H082 229 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 CSTL1Q9H114 145 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 GULP1Q9UBP9 304 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 SERGEFQ9UGK8 458 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 IL20RAQ9UHF4 553 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 FOXJ3Q9UPW0 622 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 ANGPT4Q9Y264 503 aa8.09□□□□□ -1.11
CDC42BPA-206ENST00000429440 CKAP5Q14008 2032 aa8.09□□□□□ -1.12
CDC42BPA-206ENST00000429440 UNC119BA6NIH7 251 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 UMAD1C9J7I0 102 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 AHSA1O95433 338 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 CST2P09228 141 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 PGAM2P15259 253 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 MMP11P24347 488 aa8.08□□□□□ -1.12
CDC42BPA-206ENST00000429440 RABIFP47224 123 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms