RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 BLOC1S5-TXNDC5H3BN57 136 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 DHHO43323 396 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 SHOX2O60902 331 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-209ENST00000428728 BCL10O95999 233 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 ASAH2BP0C7U1 165 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 FAM157BP0CG42 384 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 OR8G3PP0DMU2 310 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 EVX1P49640 407 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 GZMMP51124 257 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 SEC24CP53992 1094 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 CLRN1P58418 232 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 MYBPC1Q00872 1141 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 FXNQ16595 210 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 ALKBH6Q3KRA9 238 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 LRFN4Q6PJG9 635 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 DEF8Q6ZN54 512 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 HDXQ7Z353 690 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 NOXO1Q8NFA2 376 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 OR4K5Q8NGD3 323 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 PFN4Q8NHR9 129 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 RASSF5Q8WWW0 418 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 PRSS27Q9BQR3 290 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 SIKE1Q9BRV8 207 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 SLC19A3Q9BZV2 496 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 NARFLQ9H6Q4 476 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 RNF121Q9H920 327 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 MEPEQ9NQ76 525 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-209ENST00000428728 DUSP13Q9UII6 198 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 SH3GLB1Q9Y371 365 aa14.68□□□□□ -0.06
TRIM39-209ENST00000428728 ENTPD5O75356 428 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 FARS2O95363 451 aaKnown RBP14.67□□□□□ -0.06
TRIM39-209ENST00000428728 IGHG1P01857 330 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 HPXP02790 462 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 SERPINA5P05154 406 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 F13BP05160 661 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 VIMP08670 466 aaKnown RBP14.67□□□□□ -0.06
TRIM39-209ENST00000428728 QDPRP09417 244 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 CCL2P13500 99 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 UGT2B15P54855 530 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 TAS2R41P59536 307 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 RPL18Q07020 188 aaKnown RBP14.67□□□□□ -0.06
TRIM39-209ENST00000428728 SF3A3Q12874 501 aaKnown RBP eCLIP14.67□□□□□ -0.06
TRIM39-209ENST00000428728 ELFN2Q5R3F8 820 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 NANOGP8Q6NSW7 305 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 TMEM53Q6P2H8 277 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 CCDC80Q76M96 950 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 PAQR4Q8N4S7 273 aaPredicted RBP14.67□□□□□ -0.06
TRIM39-209ENST00000428728 LINC01356Q8N9X3 169 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 SYT14Q8NB59 555 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 SLC30A7Q8NEW0 376 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 HPS1Q92902 700 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 ZNF347Q96SE7 839 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 C19orf24Q9BVV8 132 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 MS4A5Q9H3V2 200 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 NANOGQ9H9S0 305 aa14.67□□□□□ -0.06
TRIM39-209ENST00000428728 A0A1W2PRG6 482 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 FXYD1O00168 92 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 NCR1O76036 304 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 NAT2P11245 290 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 CDH15P55291 814 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 RUNX1T1Q06455 604 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 CYLC2Q14093 348 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-209ENST00000428728 MMEL1Q495T6 779 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 REP15Q6BDI9 236 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 RGS7BPQ6MZT1 257 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-209ENST00000428728 NKAIN4Q8IVV8 208 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 TMEM255BQ8WV15 326 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 ECSITQ9BQ95 431 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 CDH20Q9HBT6 801 aa14.66□□□□□ -0.06
TRIM39-209ENST00000428728 SVEP1Q4LDE5 3571 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 MRASO14807 208 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 OR7A10O76100 309 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 MT-ND1P03886 318 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 THBS2P35442 1172 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 SRP14P37108 136 aaKnown RBP14.65□□□□□ -0.06
TRIM39-209ENST00000428728 GPR6P46095 362 aaPredicted RBP14.65□□□□□ -0.06
TRIM39-209ENST00000428728 ZNF84P51523 738 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 ERVS71-1P61550 626 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 NKPD1Q17RQ9 610 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 METTL21CQ5VZV1 264 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 RINLQ6ZS11 566 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 SLC16A14Q7RTX9 510 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 CALHM3Q86XJ0 350 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 LRRC18Q8N456 261 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 ICA1LQ8NDH6 482 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 ASB10Q8WXI3 467 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 MCHR2Q969V1 340 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 LRRC58Q96CX6 371 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 SGTBQ96EQ0 304 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 VIPAS39Q9H9C1 493 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 ARGLU1Q9NWB6 273 aaPredicted RBP14.65□□□□□ -0.06
TRIM39-209ENST00000428728 BAG5Q9UL15 447 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 TANC2Q9HCD6 1990 aa14.65□□□□□ -0.06
TRIM39-209ENST00000428728 CLPTM1O96005 669 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 LCKP06239 509 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 SAGP10523 405 aaPredicted RBP14.64□□□□□ -0.07
TRIM39-209ENST00000428728 FUT1P19526 365 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 COL8A2P25067 703 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 AQP2P41181 271 aa14.64□□□□□ -0.07
TRIM39-209ENST00000428728 OR1E2P47887 323 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms