RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
VARS2-203ENST00000428017 USB1Q9BQ65 265 aaKnown RBP13.34□□□□□ -0.27
VARS2-203ENST00000428017 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
VARS2-203ENST00000428017 RIBC2Q9H4K1 309 aa13.34□□□□□ -0.27
VARS2-203ENST00000428017 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
VARS2-203ENST00000428017 USE1Q9NZ43 259 aa13.34□□□□□ -0.27
VARS2-203ENST00000428017 DIDO1Q9BTC0 2240 aaKnown RBP13.33□□□□□ -0.27
VARS2-203ENST00000428017 NCOA6Q14686 2063 aaPredicted RBP13.33□□□□□ -0.27
VARS2-203ENST00000428017 RPL36A-HNRNPH2H7BZ11 118 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 MITFO75030 526 aaPredicted RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 CLDN1O95832 211 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 TP53P04637 393 aaPredicted RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 HMGN1P05114 100 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 ALPLP05186 524 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 ITGA5P08648 1049 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 HIST1H1CP16403 213 aaKnown RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 GRNP28799 593 aaKnown RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 GUCA1AP43080 201 aaPredicted RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 GIPRP48546 466 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 TSC22D1Q15714 1073 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 STK11Q15831 433 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 PGGHGQ32M88 737 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 PHYHD1Q5SRE7 291 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 LEG1Q6P5S2 330 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 DNM1P34Q6PK57 102 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 KLHL24Q6TFL4 600 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 IQCF1Q8N6M8 205 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 C1orf162Q8NEQ5 155 aaPredicted RBP13.33□□□□□ -0.28
VARS2-203ENST00000428017 OR52E2Q8NGJ4 325 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 NSMAFQ92636 917 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 MCHR2Q969V1 340 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 PLEKHA8Q96JA3 519 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 MED18Q9BUE0 208 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 PRRG3Q9BZD7 231 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 OR10A4Q9H209 315 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 RERGLQ9H628 205 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 C8orf4Q9NR00 106 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 KLHL21Q9UJP4 597 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 RELNP78509 3460 aa13.33□□□□□ -0.28
VARS2-203ENST00000428017 SLC22A23A1A5C7 686 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 ZNF99A8MXY4 864 aaPredicted RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 C19orf84I3L1E1 186 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 DHHO43323 396 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 ZNF3P17036 446 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 CRABP1P29762 137 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 GRK5P34947 590 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 KIR2DL3P43628 341 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 UBE2NP61088 152 aaKnown RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 ARF1P84077 181 aaKnown RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 SLC34A1Q06495 639 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 FMODQ06828 376 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.32□□□□□ -0.28
VARS2-203ENST00000428017 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 LRRC36Q1X8D7 754 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 ANKRD16Q6P6B7 361 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 LRFN4Q6PJG9 635 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 MEX3BQ6ZN04 569 aaKnown RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 LINGO2Q7L985 606 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 SDR9C7Q8NEX9 313 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 OR4Q3Q8NH05 313 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 MUCL1Q96DR8 90 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 SLC38A2Q96QD8 506 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 NMNAT3Q96T66 252 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 SYT4Q9H2B2 425 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 VCXQ9H320 206 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 RNPEPL1Q9HAU8 725 aa13.32□□□□□ -0.28
VARS2-203ENST00000428017 TMEFF2Q9UIK5 374 aaPredicted RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 RRP15Q9Y3B9 282 aaKnown RBP13.32□□□□□ -0.28
VARS2-203ENST00000428017 CASKO14936 926 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 SLC16A7O60669 478 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 FARS2O95363 451 aaKnown RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 SLC2A10O95528 541 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 PAICSP22234 425 aaKnown RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 CCKARP32238 428 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 FOXG1P55316 489 aaPredicted RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 NPRL3Q12980 569 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 SNTB1Q13884 538 aaKnown RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 PTGES3Q15185 160 aaKnown RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 GABRA6Q16445 453 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 ZNF813Q6ZN06 617 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 SSX8Q7RTT4 187 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 P2RY8Q86VZ1 359 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 C17orf78Q8N4C9 275 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 OR1K1Q8NGR3 316 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 HSD17B8Q92506 261 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 PSMG3-AS1Q96PY0 264 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 SNX18Q96RF0 628 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 FOXB1Q99853 325 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 SLC25A19Q9HC21 320 aa13.31□□□□□ -0.28
VARS2-203ENST00000428017 VSX1Q9NZR4 365 aaPredicted RBP13.31□□□□□ -0.28
VARS2-203ENST00000428017 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 A0A096LPE4 126 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 A0A1W2PPL8 197 aa13.3□□□□□ -0.28
VARS2-203ENST00000428017 A0A1W2PPZ6 126 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms