RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 POU3F4P49335 361 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 OLFML2AQ68BL7 652 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 STAC2Q6ZMT1 411 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 TMEM151BQ8IW70 566 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 ZBTB44Q8NCP5 570 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 GPBAR1Q8TDU6 330 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 FOXQ1Q9C009 403 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 ACTR6Q9GZN1 396 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 GHITMQ9H3K2 345 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 GPN1Q9HCN4 374 aaPredicted RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 DUSP22Q9NRW4 184 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 PRR13Q9NZ81 148 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 AKR7A3O95154 331 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 RENP00797 406 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 DMKNQ6E0U4 476 aaPredicted RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 RPL22L1Q6P5R6 122 aaKnown RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 ZNF550Q7Z398 422 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 WNT2BQ93097 391 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 DIABLOQ9NR28 239 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 ZNF223Q9UK11 482 aaPredicted RBP12.15□□□□□ -0.46
USP42-203ENST00000426246 DNAJC13O75165 2243 aa12.15□□□□□ -0.46
USP42-203ENST00000426246 A0A0J9YY10 115 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 A0A1B0GV50 99 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 C5orf51A6NDU8 294 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 TACSTD2P09758 323 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 GLI4P10075 376 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 EIF2B1Q14232 305 aaKnown RBP12.15□□□□□ -0.47
USP42-203ENST00000426246 FZD2Q14332 565 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 CDNFQ49AH0 187 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 GLYATL3Q5SZD4 288 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 SLC22A10Q63ZE4 541 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 CPNE2Q96FN4 548 aaPredicted RBP12.15□□□□□ -0.47
USP42-203ENST00000426246 SLCO1C1Q9NYB5 712 aa12.15□□□□□ -0.47
USP42-203ENST00000426246 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 SPTY2D1-AS1A0A0U1RR47 76 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TGFBR3LH3BV60 316 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TBX19O60806 448 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 RABIFP47224 123 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 P2RX1P51575 399 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 GPR143P51810 404 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TAS2R20P59543 309 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 SLC6A19Q695T7 634 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 UNQ6126/PRO20091Q6UXV3 157 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ZNF101Q8IZC7 436 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 BATF2Q8N1L9 274 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 TEX19Q8NA77 164 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ANKRD9Q96BM1 317 aaPredicted RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 KCNJ15Q99712 375 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 PILRAQ9UKJ1 303 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 FREM2Q5SZK8 3169 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 A0A0G2JK05 382 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 A0A1W2PPC4 97 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 CYR61O00622 381 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ACAA2P42765 397 aaKnown RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 AP3S2P59780 193 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 FMODQ06828 376 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 C2orf68Q2NKX9 166 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ZNF227Q86WZ6 799 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ST8SIA2Q92186 375 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ZNF230Q9UIE0 474 aaPredicted RBP12.14□□□□□ -0.47
USP42-203ENST00000426246 CAMK2AQ9UQM7 478 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 EMC9Q9Y3B6 208 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
USP42-203ENST00000426246 PDCD5O14737 125 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 WISP1O95388 367 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 MAP2K6P52564 334 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 CAMK2DQ13557 499 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 TMPRSS11FQ6ZWK6 438 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 BTN2A1Q7KYR7 527 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 RNF113BQ8IZP6 322 aaKnown RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 OR11G2Q8NGC1 345 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 BAHD1Q8TBE0 780 aaPredicted RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
USP42-203ENST00000426246 LPAR4Q99677 370 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 NTMQ9P121 344 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 ST6GALNAC2Q9UJ37 374 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 AGPAT2O15120 278 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 IGF2P01344 180 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 UBL4AP11441 157 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 DIO1P49895 249 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 ZP1P60852 638 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 ADAMTS18Q8TE60 1221 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 KLHDC7BQ96G42 594 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 GPER1Q99527 375 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 MFFQ9GZY8 342 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 MED29Q9NX70 200 aa12.13□□□□□ -0.47
USP42-203ENST00000426246 WNT16Q9UBV4 365 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms