RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MED25Q71SY5 747 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MCATQ8IVS2 390 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PM20D2Q8IYS1 436 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PRR22Q8IZ63 422 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF454Q8N9F8 522 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF417Q8TAU3 575 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SCARB1Q8WTV0 552 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PNPLA2Q96AD5 504 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC25A36Q96CQ1 311 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 KTI12Q96EK9 354 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 DMRTA2Q96SC8 542 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 KLHDC3Q9BQ90 382 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MRI1Q9BV20 369 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 C12orf10Q9HB07 376 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 WBP1LQ9NX94 342 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 OBP2AQ9NY56 170 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 KCNG2Q9UJ96 466 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC22A13Q9Y226 551 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 RWDD3Q9Y3V2 267 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 NPIPB9F8W1W9 429 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 CLDN4O14493 209 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PRAMEF2O60811 474 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 CTAG2O75638 210 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 LDOC1O95751 146 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 LIPCP11150 499 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 HNRNPA2B1P22626 353 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SDHAP31040 664 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MNDAP41218 407 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PSMD4P55036 377 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 RPL18Q07020 188 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 GK2Q14410 553 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC36A1Q7Z2H8 476 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PDZD9Q8IXQ8 264 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 WBP1Q96G27 269 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 ELOVL3Q9HB03 270 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MRPS33Q9Y291 106 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 CNTRLQ7Z7A1 2325 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 LTBP2Q14767 1821 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 M0QYG6 137 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 OR6A2O95222 327 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 NUDT14O95848 222 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 RENP00797 406 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 AKAIN1P0CW23 69 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MEP1BQ16820 701 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 LRRC37A5PQ49AS3 106 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 C1QL3Q5VWW1 255 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 WBP2NLQ6ICG8 309 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 KRT77Q7Z794 578 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 PRSS35Q8N3Z0 413 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM3DQ96BQ1 224 aa6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 MMABQ96EY8 250 aaPredicted RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 FARSAQ9Y285 508 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-202ENST00000425518 SZT2Q5T011 3432 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CEP290O15078 2479 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 LOC100509620A0A075B734 347 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TRBV5-5A0A0J9YX44 114 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC22A23A1A5C7 686 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TUBAL3A6NHL2 446 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 C17orf51A8MQB3 221 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ITGA5P08648 1049 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CSF1P09603 554 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ALOX5APP20292 161 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 MAOBP27338 520 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 RPS4XP62701 263 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 DHODHQ02127 395 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ATXN7L3Q14CW9 347 aaPredicted RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SCGB2B2Q4G0G5 96 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 MESTQ5EB52 335 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 BEX5Q5H9J7 111 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM74A1Q5RGS3 127 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 STEAP1BQ6NZ63 245 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ANKRD16Q6P6B7 361 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 FAM122BQ7Z309 247 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CDC20BQ86Y33 519 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 BOLLQ8N9W6 283 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 OR13H1Q8NG92 308 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 LHFPL5Q8TAF8 219 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 STK35Q8TDR2 534 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ZNF524Q96C55 264 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 INTS14Q96SY0 518 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TMPRSS13Q9BYE2 586 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 EVA1AQ9H8M9 152 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 MMP25Q9NPA2 562 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 PNO1Q9NRX1 252 aaKnown RBP6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 GPR160Q9UJ42 338 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 HIF3AQ9Y2N7 669 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 DCDC2BA2VCK2 349 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 CDC14CA4D256 554 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TRIM77I1YAP6 450 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 ABHD16AO95870 558 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TNFP01375 233 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 TACR3P29371 465 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 SLC25A1P53007 311 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 RAB11BQ15907 218 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 WDR38Q5JTN6 314 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 MANEAQ5SRI9 462 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 NKAIN2Q5VXU1 208 aa6.82□□□□□ -1.32
SMARCC1-202ENST00000425518 NKD1Q969G9 470 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms