RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ICOSLGO75144 302 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 HIST1H2ABP04908 130 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 CLDN6P56747 220 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 EGR4Q05215 589 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 SERTAD2Q14140 314 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 LIPNQ5VXI9 398 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 HIST3H2AQ7L7L0 130 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 LUZP2Q86TE4 346 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 ZSCAN1Q8NBB4 408 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 HAVCR2Q8TDQ0 301 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 ZNF431Q8TF32 576 aaPredicted RBP9.67□□□□□ -0.86
CUX1-205ENST00000425244 SMIM4Q8WVI0 70 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 HIST1H2ACQ93077 130 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 MS4A3Q96HJ5 214 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 FAM86C1Q9NVL1 165 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 MRM2Q9UI43 246 aaKnown RBP9.67□□□□□ -0.86
CUX1-205ENST00000425244 MGAT4AQ9UM21 535 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 HIF3AQ9Y2N7 669 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 KIF26BQ2KJY2 2108 aa9.67□□□□□ -0.86
CUX1-205ENST00000425244 C7orf66A4D0T2 115 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 AIPO00170 330 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 KHDRBS3O75525 346 aaKnown RBP9.66□□□□□ -0.86
CUX1-205ENST00000425244 ITGA10O75578 1167 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 PLGP00747 810 aaPredicted RBP9.66□□□□□ -0.86
CUX1-205ENST00000425244 TACSTD2P09758 323 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ANXA3P12429 323 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SDHAP31040 664 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC37A1P57057 533 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 HSF2Q03933 536 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 KLF9Q13886 244 aaPredicted RBP9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC16A9Q7RTY1 509 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 FAM122BQ7Z309 247 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 D2HGDHQ8N465 521 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 C9orf62Q8N4C0 152 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 OR52I2Q8NH67 350 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 OR5AK2Q8NH90 309 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 THEM6Q8WUY1 208 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC25A36Q96CQ1 311 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 RTN4RQ9BZR6 473 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SYT4Q9H2B2 425 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 APMAPQ9HDC9 416 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 DCAF16Q9NXF7 216 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ANKRD10Q9NXR5 420 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC23A1Q9UHI7 598 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 LAMP5Q9UJQ1 280 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 FLVCR2Q9UPI3 526 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 V9GY05 133 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 IL33O95760 270 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 HLA-DQA2P01906 255 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 MAS1P04201 325 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 RORAP35398 523 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 IL10RAQ13651 578 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ST3GAL2Q16842 350 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 PXDC1Q5TGL8 231 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 STPG1Q5TH74 334 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 FNDC7Q5VTL7 733 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 C1QL3Q5VWW1 255 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 FAM199XQ6PEV8 388 aaPredicted RBP9.66□□□□□ -0.86
CUX1-205ENST00000425244 UNQ9370/PRO34162Q6UXP9 181 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 DPY19L4Q7Z388 723 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 OR6V1Q8N148 313 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 OR8H1Q8NGG4 311 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ADAMTS14Q8WXS8 1223 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 TAAR8Q969N4 342 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC25A38Q96DW6 304 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 SLC41A2Q96JW4 573 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 TSPAN32Q96QS1 320 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 GPX7Q96SL4 187 aaPredicted RBP9.66□□□□□ -0.86
CUX1-205ENST00000425244 ULBP3Q9BZM4 244 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ZCCHC4Q9H5U6 513 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 WDR76Q9H967 626 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 LAMA5O15230 3695 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 MUC6Q6W4X9 2439 aa9.66□□□□□ -0.86
CUX1-205ENST00000425244 ZNF593O00488 134 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 GMDSO60547 372 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 TIAF1O95411 115 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 LDOC1O95751 146 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 IL12BP29460 328 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 PPICP45877 212 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 TOMM34Q15785 309 aaPredicted RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 ISXQ2M1V0 245 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 MESTQ5EB52 335 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 VWA2Q5GFL6 755 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 TMEM69Q5SWH9 247 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 SLC22A10Q63ZE4 541 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 FAAP20Q6NZ36 180 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 BAIAP2L2Q6UXY1 529 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 LRRC69Q6ZNQ3 347 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 MARCH3Q86UD3 253 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 TMPRSS12Q86WS5 348 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 ZNF676Q8N7Q3 588 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 LRRC75AQ8NAA5 344 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 FAM71CQ8NEG0 241 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 SYNPRQ8TBG9 265 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OR2M2Q96R28 347 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 PELOQ9BRX2 385 aaKnown RBP9.65□□□□□ -0.86
CUX1-205ENST00000425244 SLITRK2Q9H156 845 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 OR10A4Q9H209 315 aa9.65□□□□□ -0.86
CUX1-205ENST00000425244 ZNF768Q9H5H4 540 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms