RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 KCNK17Q96T54 332 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 DDOQ99489 341 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 TBX5Q99593 518 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 SLC7A10Q9NS82 523 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PRDM4Q9UKN5 801 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 DENRO43583 198 aaKnown RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 YES1P07947 543 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 QDPRP09417 244 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 GLI4P10075 376 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PSKH1P11801 424 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 NSUN5P2Q63ZY6 315 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 TMEM123Q8N131 208 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 OR8J1Q8NGP2 316 aa11.89□□□□□ -0.51
PRPF39-202ENST00000424478 SLC25A44Q96H78 314 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 PAK1IP1Q9NWT1 392 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 COA3Q9Y2R0 106 aaPredicted RBP11.89□□□□□ -0.51
PRPF39-202ENST00000424478 NCOA6Q14686 2063 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 DNPH1O43598 174 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 VAMP5O95183 116 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 HMGN1P05114 100 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 SCG5P05408 212 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 SPI1P17947 270 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 BMP5P22003 454 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 KIR2DL2P43627 348 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 LUZP2Q86TE4 346 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 RFLNBQ8N5W9 214 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 PROKR2Q8NFJ6 384 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 RBM24Q9BX46 236 aaKnown RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 OPN3Q9H1Y3 402 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 SEC61A2Q9H9S3 476 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 CRLF2Q9HC73 371 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 MAGEB4O15481 346 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 FAPQ12884 760 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 TMEM201Q5SNT2 666 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 AADACL4Q5VUY2 407 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 BTLAQ7Z6A9 289 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 NOXO1Q8NFA2 376 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 OR4F15Q8NGB8 312 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 MCHR2Q969V1 340 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 MRPL13Q9BYD1 178 aaKnown RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 PAQR5Q9NXK6 330 aaPredicted RBP11.88□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF835Q9Y2P0 537 aa11.88□□□□□ -0.51
PRPF39-202ENST00000424478 A0A1W2PPL8 197 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 SELENOFO60613 162 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TXNDC12O95881 172 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 IFNGP01579 166 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 IGHG1P01857 330 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 IGHMP01871 453 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 HLA-DQA2P01906 255 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 CDH11P55287 796 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 GPR139Q6DWJ6 353 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 UGT2A3Q6UWM9 527 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF100Q8IYN0 542 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 SLC43A2Q8N370 569 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 OR51G2Q8NGK0 314 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 OR6X1Q8NH79 312 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 SF3B5Q9BWJ5 86 aaKnown RBP11.87□□□□□ -0.51
PRPF39-202ENST00000424478 Q9H521 79 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 WDR76Q9H967 626 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 FANCFQ9NPI8 374 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 A0A0G2JNJ9 132 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 WDR1O75083 606 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 PATE4P0C8F1 98 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 POU4F3Q15319 338 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 C6orf141Q5SZD1 244 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 AHSA2Q719I0 299 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 LIX1LQ8IVB5 337 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 DEPDC4Q8N2C3 294 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 SETD9Q8NE22 299 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TEX12Q9BXU0 123 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 BCO1Q9HAY6 547 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 EMC7Q9NPA0 242 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 Q9UFV3 132 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 MYRFQ9Y2G1 1151 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 ZNF175Q9Y473 711 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 A0A096LPE4 126 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 A0A1W2PPZ6 126 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 PSMD9O00233 223 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 FAM20BO75063 409 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TNFSF13O75888 250 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 KRT33AO76009 404 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 RENP00797 406 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TMIGD3P0DMS9 266 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-202ENST00000424478 GSTT1P30711 240 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 RNPS1Q15287 305 aaKnown RBP11.87□□□□□ -0.51
PRPF39-202ENST00000424478 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 WNT2BQ93097 391 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 KISS1RQ969F8 398 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-202ENST00000424478 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TP63Q9H3D4 680 aaPredicted RBP11.87□□□□□ -0.51
PRPF39-202ENST00000424478 LRCH1Q9Y2L9 728 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
PRPF39-202ENST00000424478 TENM4Q6N022 2769 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 IGKV3D-15A0A087WSY6 115 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 A0A1W2PR80 420 aa11.86□□□□□ -0.51
PRPF39-202ENST00000424478 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms