RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 HPCAP84074 193 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 DGCR2P98153 550 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 PAX2Q02962 417 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 HSF2Q03933 536 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 MFSD13AQ14CX5 517 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 FASTKD3Q14CZ7 662 aaKnown RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 UAP1Q16222 522 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 CD276Q5ZPR3 534 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 EMBQ6PCB8 327 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 GPRIN3Q6ZVF9 776 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 HMGN2P46Q86SG4 172 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 VRK2Q86Y07 508 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 KLHL7Q8IXQ5 586 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 CENPLQ8N0S6 344 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 CADM2Q8N3J6 435 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 PAQR4Q8N4S7 273 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 SCAIQ8N9R8 606 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 PNLDC1Q8NA58 520 aaKnown RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 OR56A1Q8NGH5 318 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 OR5D16Q8NGK9 328 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 PYROXD1Q8WU10 500 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 ISOC1Q96CN7 298 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 WDFY2Q96P53 400 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 FOXB1Q99853 325 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 C1orf198Q9H425 327 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 ZMAT4Q9H898 229 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 RAB18Q9NP72 206 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 NANSQ9NR45 359 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 ZNRD1Q9P1U0 126 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 DNAJB11Q9UBS4 358 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 CGGBP1Q9UFW8 167 aaPredicted RBP5.22□□□□□ -1.57
SDCBP-203ENST00000424270 TBK1Q9UHD2 729 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 OSGIN1Q9UJX0 560 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 HIF3AQ9Y2N7 669 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 KCNE3Q9Y6H6 103 aa5.22□□□□□ -1.57
SDCBP-203ENST00000424270 hCG_2014768A0A024R1R8 64 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 A0A1B0GW55 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 LRRC30A6NM36 301 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF726A6NNF4 738 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 NPIPB9F8W1W9 429 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 H3BUX3 64 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 FBP2O00757 339 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 AP3D1O14617 1153 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF500O60304 480 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SEC22BO75396 215 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 UGT2B17O75795 530 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SERPINI2O75830 405 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SUPT7LO94864 414 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 AHSA1O95433 338 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CYB5R3P00387 301 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 C2P06681 752 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 LIPFP07098 398 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 RBP1P09455 135 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L2P0CJ85 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L3P0CJ86 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L5P0CJ88 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L6P0CJ89 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L7P0CJ90 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 IRF2P14316 349 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 NQO1P15559 274 aaKnown RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CPT2P23786 658 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SSTR1P30872 391 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 MPV17P39210 176 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CCT3P49368 545 aaKnown RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 HTR6P50406 440 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 MMP15P51511 669 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 MAP2K6P52564 334 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 COPZ1P61923 177 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ARF6P62330 175 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 RPS26P62854 115 aaKnown RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 EGFEM1PQ0D2K5 195 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 BNIP2Q12982 314 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CHI3L2Q15782 390 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF141Q15928 474 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SMU1Q2TAY7 513 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SPRNQ5BIV9 151 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 NKAPLQ5M9Q1 402 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 COX20Q5RI15 118 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ATAD3BQ5T9A4 648 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 MROH9Q5TGP6 573 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ATG16L1Q676U5 607 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4L9Q6RFH8 374 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 LHFPL2Q6ZUX7 228 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 OLIG3Q7RTU3 272 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CCDC91Q7Z6B0 441 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CALHM3Q86XJ0 350 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF283Q8N7M2 679 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 PAPD5Q8NDF8 572 aaKnown RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 CLHC1Q8NHS4 586 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 PPP1R35Q8TAP8 253 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 MS4A14Q96JA4 679 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 OR2M2Q96R28 347 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 OR7D2Q96RA2 312 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 SDF2Q99470 211 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 BAG1Q99933 345 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 FAM234AQ9H0X4 552 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 A4GALTQ9NPC4 353 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.21□□□□□ -1.58
SDCBP-203ENST00000424270 DUX4Q9UBX2 424 aa5.21□□□□□ -1.58
SDCBP-203ENST00000424270 TIMM22Q9Y584 194 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms