RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 AQP2P41181 271 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 ACTR1BP42025 376 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 ACTR1AP61163 376 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 ROM1Q03395 351 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 FAM53BQ14153 422 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 GPR18Q14330 331 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TEX30Q5JUR7 227 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TANGO2Q6ICL3 276 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 FAAP20Q6NZ36 180 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM205Q6UW68 189 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TAF8Q7Z7C8 310 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 GABRG1Q8N1C3 465 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 BCORP1Q8N888 145 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 OR4N2Q8NGD1 307 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 OR51S1Q8NGJ8 323 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM106AQ96A25 262 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 FAM3DQ96BQ1 224 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 WDR89Q96FK6 387 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-204ENST00000424143 INTS14Q96SY0 518 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 SFXN1Q9H9B4 322 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 FKRPQ9H9S5 495 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 SLC2A8Q9NY64 477 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 PRODH2Q9UF12 536 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 CACNA1IQ9P0X4 2223 aa13.8□□□□□ -0.2
C9orf3-204ENST00000424143 TRAV18A0A075B6X5 111 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TBC1D3DA0A087WVF3 549 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TRAV14DV4A0A0A6YYC5 116 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 A0A1B0GVT2 93 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TBC1D3LB9A6J9 549 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TEX46H3BTG2 121 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 RPP14O95059 124 aaKnown RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TBC1D3HP0C7X1 549 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 WASP42768 502 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 MAGEB1P43366 347 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 LSSP48449 732 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 POU3F4P49335 361 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 UBE2IP63279 158 aaKnown RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 FLI1Q01543 452 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 C2orf76Q3KRA6 126 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 LY6G6FQ5SQ64 297 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 DCAF12L2Q5VW00 463 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TBC1D3CQ6IPX1 549 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TMEFF1Q8IYR6 380 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TBC1D3Q8IZP1 549 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PRSS35Q8N3Z0 413 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 OR5M8Q8NGP6 311 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 OTOSQ8NHW6 89 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 RNF128Q8TEB7 428 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 DOK4Q8TEW6 326 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SLC25A28Q96A46 364 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SIPA1Q96FS4 1042 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 OR8B4Q96RC9 309 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 EXO5Q9H790 373 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 BARX1Q9HBU1 254 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 WBP1LQ9NX94 342 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 COQ3Q9NZJ6 369 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 GRHPRQ9UBQ7 328 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 KLF2Q9Y5W3 355 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 RAB19A4D1S5 217 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 LINC01553A4QN01 128 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 POM121BA6NF01 834 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 NUDT19A8MXV4 375 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 DNASE2O00115 360 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SLC31A1O15431 190 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 OR4E1P0C645 316 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PTHLHP12272 177 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 KIR3DL2P43630 455 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SOX2P48431 317 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SLC17A1Q14916 467 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF169Q14929 603 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PRTGQ2VWP7 1150 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 VWA2Q5GFL6 755 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PABPC1L2AQ5JQF8 200 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PHF19Q5T6S3 580 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 GLT8D1Q68CQ7 371 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 FAHD2BQ6P2I3 314 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM184AQ6ZMB5 413 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 YAF2Q8IY57 180 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 CLRN3Q8NCR9 226 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 ELSPBP1Q96BH3 223 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 SEH1LQ96EE3 360 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 FAHD2AQ96GK7 314 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 DMRTA2Q96SC8 542 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 ZNF587Q96SQ5 575 aaPredicted RBP13.79□□□□□ -0.2
C9orf3-204ENST00000424143 ADAM19Q9H013 955 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 PIGMQ9H3S5 423 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 LRIT1Q9P2V4 623 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 HRH3Q9Y5N1 445 aa13.79□□□□□ -0.2
C9orf3-204ENST00000424143 KIR2DS5A0A0G2JLQ3 304 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 A0A0G2JNG1 304 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 TMEM82A0PJX8 343 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 KIR2DS3K7RE56 304 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 LDLRAD4O15165 306 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 BCL2L11O43521 198 aa13.78□□□□□ -0.2
C9orf3-204ENST00000424143 SIX6O95475 246 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms