RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF879B4DU55 563 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 PPM1BO75688 479 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 EMP2P54851 167 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 MFAP5Q13361 173 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 MZT2BQ6NZ67 158 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 OGFOD3Q6PK18 319 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 LYPD8Q6UX82 237 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 CACNG6Q9BXT2 260 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 ISYNA1Q9NPH2 558 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 POLE3Q9NRF9 147 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 HIF3AQ9Y2N7 669 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 EMC9Q9Y3B6 208 aa10.75□□□□□ -0.69
PTPRN-204ENST00000423636 IGHV5-10-1A0A0J9YXX1 117 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 RENP00797 406 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 SPINK2P20155 84 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PRKXP51817 358 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 RPS4XP62701 263 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 EIF2B1Q14232 305 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 CDONQ4KMG0 1287 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 WDR38Q5JTN6 314 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 LRRC28Q86X40 367 aaPredicted RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 HOXB13Q92826 284 aaPredicted RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ZNF285Q96NJ3 590 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 INTS14Q96SY0 518 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PTDSS2Q9BVG9 487 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 FKBP7Q9Y680 259 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ANXA2P2A6NMY6 339 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 C10orf142B7Z368 130 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ZNF814B7Z6K7 855 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 TSPAN2O60636 221 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 KHDRBS3O75525 346 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 UPK3AO75631 287 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ANXA2P07355 339 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 GDNFP39905 211 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ACTC1P68032 377 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ACTA1P68133 377 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 KRT77Q7Z794 578 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 LRRC75AQ8NAA5 344 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 CADM4Q8NFZ8 388 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 OR52B4Q8NGK2 314 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 OR2T4Q8NH00 348 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 KCTD12Q96CX2 325 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 GNRHR2Q96P88 292 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 CITED4Q96RK1 184 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 METTL7AQ9H8H3 244 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 EMC7Q9NPA0 242 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 MRPL22Q9NWU5 206 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 ZNF281Q9Y2X9 895 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 CACNG2Q9Y698 323 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 NOTOA8MTQ0 251 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 TEX46H3BTG2 121 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 EFNA2O43921 213 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PNMTP11086 282 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 BTCP35070 178 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 RFC3P40938 356 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PSMD4P55036 377 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 SLC36A2Q495M3 483 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 RPL22L1Q6P5R6 122 aaKnown RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 STAC2Q6ZMT1 411 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PXKQ7Z7A4 578 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 C17orf82Q86X59 251 aaPredicted RBP10.74□□□□□ -0.69
PTPRN-204ENST00000423636 COMMD2Q86X83 199 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 OR4D10Q8NGI6 311 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 YIPF5Q969M3 257 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 SOSTQ9BQB4 213 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 SEC22CQ9BRL7 303 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 KLHL21Q9UJP4 597 aa10.74□□□□□ -0.69
PTPRN-204ENST00000423636 PRR14LQ5THK1 2151 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 FABP7O15540 132 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ORC5O43913 435 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NPR2P20594 1047 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 CDK2P24941 298 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 GPR85P60893 370 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 GALK2Q01415 458 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 EFR3AQ14156 821 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NDUFAF7Q7L592 441 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 OR2G2Q8NGZ5 317 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 TRIM63Q969Q1 353 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 MAP6Q96JE9 813 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 OR5B2Q96R09 309 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 CHRDQ9H2X0 955 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 OR5V1Q9UGF6 321 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NCOA6Q14686 2063 aaPredicted RBP10.73□□□□□ -0.69
PTPRN-204ENST00000423636 PIEZO2Q9H5I5 2752 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 FITM1A5D6W6 292 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 SC5DO75845 299 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 HPXP02790 462 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 BGLAPP02818 100 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 PGCP20142 388 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 UQCRC1P31930 480 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ACTA2P62736 377 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ACTG2P63267 376 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ACSM1Q08AH1 577 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 SNTB2Q13425 540 aaKnown RBP10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ALKBH1Q13686 389 aaKnown RBP10.73□□□□□ -0.69
PTPRN-204ENST00000423636 WDR45BQ5MNZ6 344 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ANKRD37Q7Z713 158 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 MS4A15Q8N5U1 240 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NPRL2Q8WTW4 380 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NXPE2Q96DL1 559 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms