RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 A0A1B0GWA3 101 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 TRAPPC2LH3BP13 241 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 PTHP01270 115 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ALDOCP09972 364 aaKnown RBP14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ZCCHC18P0CG32 403 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF12P17014 697 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 MAKP20794 623 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 CSNK1A1P48729 337 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ZNF81P51508 661 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 PMS2P3Q13401 168 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ALG10BQ5I7T1 473 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 FAM91A1Q658Y4 838 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ULK3Q6PHR2 472 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 DPPA2Q7Z7J5 298 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 MIER2Q8N344 545 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 OR1J2Q8NGS2 313 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 TAF15Q92804 592 aaKnown RBP eCLIP14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 TMIGD2Q96BF3 282 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 ASPNQ9BXN1 380 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 RSPO3Q9BXY4 272 aaPredicted RBP14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 OR51B6Q9H340 312 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 TPT1P8Q9HAU6 139 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 TMEM38BQ9NVV0 291 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 AIG1Q9NVV5 245 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 GLTPQ9NZD2 209 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 INSIG2Q9Y5U4 225 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 WNK1Q9H4A3 2382 aa14.15□□□□□ -0.14
CHCHD3-202ENST00000423635 A0A1B0GUS0 222 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 PLPP3O14495 311 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 TM9SF1O15321 606 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 IGHV1-46P01743 117 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 DRD4P21917 467 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 HTR2AP28223 471 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 MMP15P51511 669 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 ABCE1P61221 599 aaKnown RBP14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 TBC1D28Q2M2D7 210 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 C16orf87Q6PH81 154 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 LRFN4Q6PJG9 635 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 C9orf139Q6ZV77 190 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 CPEB3Q8NE35 698 aaKnown RBP14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 OR6X1Q8NH79 312 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 EPYCQ99645 322 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 SH3GL3Q99963 347 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 NUF2Q9BZD4 464 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 MEAF6Q9HAF1 191 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 UBAP1Q9NZ09 502 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 PDP1Q9P0J1 537 aaPredicted RBP14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 TESQ9UGI8 421 aaKnown RBP14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 HAO1Q9UJM8 370 aa14.15□□□□□ -0.15
CHCHD3-202ENST00000423635 ISPDA4D126 451 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 TMEM247A6NEH6 219 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 TYROBPO43914 113 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 IGHMP01871 453 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 SERPINE1P05121 402 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 ADH4P08319 380 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 AHCYP23526 432 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 TMEM53Q6P2H8 277 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 SLC47A1Q96FL8 570 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 MOGAT1Q96PD6 335 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 SORT1Q99523 831 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 MS4A7Q9GZW8 240 aaPredicted RBP14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 RNF121Q9H920 327 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 LGALS13Q9UHV8 139 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 NPTNQ9Y639 398 aa14.14□□□□□ -0.15
CHCHD3-202ENST00000423635 SPRY3O43610 288 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 FARS2O95363 451 aaKnown RBP14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 IL6P05231 212 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 PRKAR1BP31321 381 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 MTNR1AP48039 350 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 SLC6A9P48067 706 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 BIDP55957 195 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 SLC36A2Q495M3 483 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 NRN1LQ496H8 165 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 HIST2H2BDQ6DRA6 164 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 ZNF771Q7L3S4 317 aaPredicted RBP14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 KIRREL3Q8IZU9 778 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 OR1J1Q8NGS3 322 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 MRI1Q9BV20 369 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 EGLN1Q9GZT9 426 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 MMP27Q9H306 513 aa14.13□□□□□ -0.15
CHCHD3-202ENST00000423635 IQCMA0A1B0GVH7 501 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 A8MXK9 166 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 DHHO43323 396 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 IGHV2-70P01814 119 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 PPIAL4GP0DN37 164 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 ETS2P15036 469 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 LIPAP38571 399 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 GLO1Q04760 184 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 PAX8Q06710 450 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 SRSF4Q08170 494 aaKnown RBP14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 ZNF718Q3SXZ3 478 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 ZNF362Q5T0B9 420 aaPredicted RBP14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 ICA1LQ8NDH6 482 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 BBS10Q8TAM1 723 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 WFDC12Q8WWY7 111 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 ZBTB18Q99592 522 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 CITED1Q99966 193 aa14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 PATZ1Q9HBE1 687 aaKnown RBP14.12□□□□□ -0.15
CHCHD3-202ENST00000423635 NPHS2Q9NP85 383 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms