RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 STX16O14662 325 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ATP5HO75947 161 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 IGHG4P01861 327 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ELANEP08246 267 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ANXA5P08758 320 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FRMD6-AS1P0C7T7 363 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 P0DMU3 169 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FAM231AP0DMU4 169 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FAM231CP0DMU5 169 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 XPAP23025 273 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CXCR2P25025 360 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 DNA2P51530 1060 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CBX1P83916 185 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF616Q08AN1 781 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 STX1AQ16623 288 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 HSP90AA5PQ58FG0 334 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CFAP58Q5T655 872 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FAM162BQ5T6X4 162 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 WDR25Q64LD2 544 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 C8orf82Q6P1X6 216 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TMEM108Q6UXF1 575 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 IKBIPQ70UQ0 350 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ABHD12BQ7Z5M8 362 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OTUD6BQ8N6M0 293 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 POM121L12Q8N7R1 296 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 OR5K1Q8NHB7 308 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF671Q8TAW3 534 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ACTL9Q8TC94 416 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SFXN5Q8TD22 340 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CORO2AQ92828 525 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MRFAP1L1Q96HT8 127 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 CLUHP3Q96NS8 147 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SERPINB12Q96P63 405 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 F2RL3Q96RI0 385 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 GPX7Q96SL4 187 aaPredicted RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TMEM246Q9BRR3 403 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MED18Q9BUE0 208 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ROGDIQ9GZN7 287 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 REEP4Q9H6H4 257 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RPF2Q9H7B2 306 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 VIPAS39Q9H9C1 493 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 MRPL47Q9HD33 250 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ALKBH4Q9NXW9 302 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 NDUFA13Q9P0J0 144 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 COX16Q9P0S2 106 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 RNF14Q9UBS8 474 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 SLC7A8Q9UHI5 535 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 TRMT6Q9UJA5 497 aaKnown RBP1.31□□□□□ -2.2
UBE2W-202ENST00000422906 FBXL3Q9UKT7 428 aa1.31□□□□□ -2.2
UBE2W-202ENST00000422906 ZC3H12DA2A288 527 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF860A6NHJ4 632 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CEACAM18A8MTB9 384 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF99A8MXY4 864 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF587BE7ETH6 402 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 NR5A2O00482 541 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 B3GALT2O43825 422 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HNRNPCL1O60812 293 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 NOS1APO75052 506 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CDC123O75794 336 aaPredicted RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ANGPTL1O95841 491 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CLPTM1O96005 669 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 FAM58BPP0C7Q3 252 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 DDCP20711 480 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 EIF1P41567 113 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PAFAH1B1P43034 410 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 HTR3AP46098 478 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCT3P49368 545 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RASSF2P50749 326 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ALDH3A2P51648 485 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CAV3P56539 151 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ERVS71-1P61550 626 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 SNRPD2P62316 118 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C17orf67Q0P5P2 114 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CRYMQ14894 314 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C6orf163Q5TEZ5 329 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF626Q68DY1 528 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 MARCH3Q86UD3 253 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 FAM90A1Q86YD7 464 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CPNE9Q8IYJ1 553 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C10orf111Q8N326 155 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C5orf56Q8N8D9 126 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF439Q8NDP4 499 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PIK3C3Q8NEB9 887 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RPS4Y2Q8TD47 263 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CKAP2Q8WWK9 683 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 RIT1Q92963 219 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ARL8AQ96BM9 186 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 C12orf43Q96C57 262 aaKnown RBP1.3□□□□□ -2.2
UBE2W-202ENST00000422906 FBXO17Q96EF6 278 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 GAFA1Q96PS6 74 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 PANX3Q96QZ0 392 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 CCDC28BQ9BUN5 200 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 MRI1Q9BV20 369 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 TSGA10Q9BZW7 698 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 GSTO2Q9H4Y5 243 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ANKRA2Q9H9E1 313 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 NEK6Q9HC98 313 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 UBP1Q9NZI7 540 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 BCAP29Q9UHQ4 241 aa1.3□□□□□ -2.2
UBE2W-202ENST00000422906 ZNF346Q9UL40 294 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms