RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 RAD51DO75771 328 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 BAG2O95816 211 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 TP53P04637 393 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 QDPRP09417 244 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ANXA8P13928 327 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 COX6B1P14854 86 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 COX5AP20674 150 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 DAPP51397 102 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 RPS6KA3P51812 740 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 RAP1BP61224 184 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 RAP1AP62834 184 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ARF1P84077 181 aaKnown RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 MYBPC1Q00872 1141 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 COX10Q12887 443 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 STK11Q15831 433 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 CEACAM16Q2WEN9 425 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ALKBH2Q6NS38 261 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 KLHL17Q6TDP4 642 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 CD300LDQ6UXZ3 194 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 FAM122BQ7Z309 247 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ABHD12BQ7Z5M8 362 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 HIPK1Q86Z02 1210 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ACBD4Q8NC06 268 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 STEAP2Q8NFT2 490 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 OR8D4Q8NGM9 314 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF519Q8TB69 540 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 MCHR2Q969V1 340 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 RASD2Q96D21 266 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ZC3HAV1LQ96H79 300 aaKnown RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ZNF570Q96NI8 536 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 MUS81Q96NY9 551 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ERMAPQ96PL5 475 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 GPX7Q96SL4 187 aaPredicted RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 TSSK6Q9BXA6 273 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 PLA2G12AQ9BZM1 189 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 ULBP2Q9BZM5 246 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 SMURF2Q9HAU4 748 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 B3GAT2Q9NPZ5 323 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 TAS2R16Q9NYV7 291 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 IL20Q9NYY1 176 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 STX18Q9P2W9 335 aaKnown RBP8.15□□□□□ -1.1
PDGFC-202ENST00000422544 REV1Q9UBZ9 1251 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 NDRG3Q9UGV2 375 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 OAZ3Q9UMX2 235 aa8.15□□□□□ -1.1
PDGFC-202ENST00000422544 A0A096LPE4 126 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 A0A1W2PPZ6 126 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 SH3D21A4FU49 640 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 CENPBD1B2RD01 187 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 H3BN98 237 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 H7C1C5 153 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 XKRYO14609 159 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 IMPA2O14732 288 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 MITFO75030 526 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 TXNDC12O95881 172 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 OSMP13725 252 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 APEHP13798 732 aaKnown RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 POU1F1P28069 291 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 NOS3P29474 1203 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 SDHAP31040 664 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 PEX19P40855 299 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 LCN6P62502 163 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 TGFBR3Q03167 851 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 CD47Q08722 323 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 KRR1Q13601 381 aaKnown RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 GABRA6Q16445 453 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 HIST3H3Q16695 136 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 SLC36A3Q495N2 470 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 MESTQ5EB52 335 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 SLC35F1Q5T1Q4 408 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 FAM205BPQ63HN1 556 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 GPR139Q6DWJ6 353 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 RPL13AP3Q6NVV1 102 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 FAHD1Q6P587 224 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF771Q7L3S4 317 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 HDDC2Q7Z4H3 204 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 PQLC1Q8N2U9 271 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 SVOPLQ8N434 492 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 NOXO1Q8NFA2 376 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 OR52L1Q8NGH7 329 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 OR4Q3Q8NH05 313 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 MAGEE2Q8TD90 523 aaPredicted RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 NSMAFQ92636 917 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 NMD3Q96D46 503 aaKnown RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 DACH2Q96NX9 599 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 RBP7Q96R05 134 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 MED18Q9BUE0 208 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 ALG12Q9BV10 488 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 OR10A4Q9H209 315 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 PAPOLBQ9NRJ5 636 aaKnown RBP8.14□□□□□ -1.11
PDGFC-202ENST00000422544 TBC1D23Q9NUY8 699 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 KIF17Q9P2E2 1029 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 POFUT2Q9Y2G5 429 aa8.14□□□□□ -1.11
PDGFC-202ENST00000422544 ACANP16112 2415 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 IGKV1D-43A0A0B4J1Z2 117 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 A0A1W2PR80 420 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 SLC22A23A1A5C7 686 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 PRSS37A4D1T9 235 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 OR5H1A6NKK0 313 aa8.13□□□□□ -1.11
PDGFC-202ENST00000422544 ZNF99A8MXY4 864 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms