RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ZNF84P51523 738 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 SNRPD2P62316 118 aaKnown RBP19.01■□□□□ 0.63
TRAF4-204ENST00000422344 MXRA7P84157 204 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 ALG10Q5BKT4 473 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 LRFN4Q6PJG9 635 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 MYPOPQ86VE0 399 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-204ENST00000422344 RNF113BQ8IZP6 322 aaKnown RBP19.01■□□□□ 0.63
TRAF4-204ENST00000422344 NOXO1Q8NFA2 376 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 ASB10Q8WXI3 467 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 ACOT11Q8WXI4 607 aaPredicted RBP19.01■□□□□ 0.63
TRAF4-204ENST00000422344 MAN2C1Q9NTJ4 1040 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 NDE1Q9NXR1 346 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 B3GNT2Q9NY97 397 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 FBXL3Q9UKT7 428 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 HIF3AQ9Y2N7 669 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 ENPP4Q9Y6X5 453 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 PLCE1Q9P212 2302 aa19.01■□□□□ 0.63
TRAF4-204ENST00000422344 MXRA5Q9NR99 2828 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 IGHV2OR16-5A0A0B4J2B6 119 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 EFCAB9A8MZ26 197 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 CENPBD1B2RD01 187 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 FFAR1O14842 300 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 OR8G3PP0DMU2 310 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 ACADSP16219 412 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 TCN1P20061 433 aaPredicted RBP19■□□□□ 0.63
TRAF4-204ENST00000422344 PRKCDQ05655 676 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 LAPTM4AQ15012 233 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 SAMD4BQ5PRF9 694 aaKnown RBP19■□□□□ 0.63
TRAF4-204ENST00000422344 C16orf89Q6UX73 402 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 PGAM4Q8N0Y7 254 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 SLC22A24Q8N4F4 322 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 SYT14Q8NB59 555 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 RBM15BQ8NDT2 890 aaKnown RBP19■□□□□ 0.63
TRAF4-204ENST00000422344 NUP37Q8NFH4 326 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 ZNF347Q96SE7 839 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 DENND2DQ9H6A0 471 aaPredicted RBP19■□□□□ 0.63
TRAF4-204ENST00000422344 ARL8BQ9NVJ2 186 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 TMEM38BQ9NVV0 291 aa19■□□□□ 0.63
TRAF4-204ENST00000422344 TRMUO75648 421 aaKnown RBP18.99■□□□□ 0.63
TRAF4-204ENST00000422344 PDE5AO76074 875 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 OR4A8P0C604 315 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 TSPAN19P0C672 248 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 NR2C1P13056 603 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 MAKP20794 623 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 GIPRP48546 466 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 RAB1AP62820 205 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 LSM11P83369 360 aaKnown RBP eCLIP18.99■□□□□ 0.631e-7■■■□□ 18.3
TRAF4-204ENST00000422344 MYBPC1Q00872 1141 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 RUNX1T1Q06455 604 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 TOP3AQ13472 1001 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-204ENST00000422344 TAF11Q15544 211 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 MBOAT2Q6ZWT7 520 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 OAFQ86UD1 273 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 FAM156AQ8NDB6 213 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 MCHR2Q969V1 340 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 ANKRD19PQ9H560 264 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 NMNAT1Q9HAN9 279 aaPredicted RBP18.99■□□□□ 0.63
TRAF4-204ENST00000422344 NOX3Q9HBY0 568 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 DCAF13Q9NV06 445 aaKnown RBP18.99■□□□□ 0.63
TRAF4-204ENST00000422344 MAGEL2Q9UJ55 1249 aa18.99■□□□□ 0.63
TRAF4-204ENST00000422344 CHD3Q12873 2000 aaKnown RBP18.98■□□□□ 0.63
TRAF4-204ENST00000422344 A0A087WUU8 490 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 NPIPB13A6NJU9 1138 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 B9A039 149 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 NPIPB4C9JG80 1138 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 RNF223E7ERA6 249 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 H1F0P07305 194 aaKnown RBP18.98■□□□□ 0.63
TRAF4-204ENST00000422344 FUT4P22083 530 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 MNAT1P51948 309 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 KRT72Q14CN4 511 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 ANKDD1AQ495B1 522 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 ARMC4Q5T2S8 1044 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 CLEC2AQ6UVW9 174 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 MEX3DQ86XN8 651 aaKnown RBP18.98■□□□□ 0.63
TRAF4-204ENST00000422344 SKA3Q8IX90 412 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 OR51A7Q8NH64 312 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 HTRA1Q92743 480 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 MS4A3Q96HJ5 214 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 CDRT15Q96T59 188 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 RHNO1Q9BSD3 238 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 MRPL13Q9BYD1 178 aaKnown RBP18.98■□□□□ 0.63
TRAF4-204ENST00000422344 NDEL1Q9GZM8 345 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 TXNIPQ9H3M7 391 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 ZNF442Q9H7R0 627 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 SPEF1Q9Y4P9 236 aa18.98■□□□□ 0.63
TRAF4-204ENST00000422344 TRAV27A0A087WT01 109 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 PRSS23O95084 383 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 HSD17B1P14061 328 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 NPR2P20594 1047 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 GPR4P46093 362 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 SLC9A3P48764 834 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 DSCR9P59020 149 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 HGFACQ04756 655 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 CD47Q08722 323 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 SNTB2Q13425 540 aaKnown RBP18.97■□□□□ 0.63
TRAF4-204ENST00000422344 DAG1Q14118 895 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 ADIPOQQ15848 244 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 HIST3H3Q16695 136 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 SWI5Q1ZZU3 235 aa18.97■□□□□ 0.63
TRAF4-204ENST00000422344 FGD3Q5JSP0 725 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms