RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 LRRC74AQ0VAA2 488 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 NPTX1Q15818 432 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 GCNT6Q5T4J0 391 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ULK3Q6PHR2 472 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 DHRS4L2Q6PKH6 230 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 NET1Q7Z628 596 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 RBM45Q8IUH3 476 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 BCL6BQ8N143 479 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 SIGLECL1Q8N7X8 197 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 SMYD1Q8NB12 490 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 OR4K5Q8NGD3 323 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 OR4D11Q8NGI4 311 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 DNAJA4Q8WW22 397 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ATP6V1G3Q96LB4 118 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF385DQ9H6B1 395 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ARMC7Q9H6L4 198 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 CACYBPQ9HB71 228 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 B3GAT2Q9NPZ5 323 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 MRPL39Q9NYK5 338 aaKnown RBP10.94□□□□□ -0.66
LINC00339-203ENST00000420503 GLTPQ9NZD2 209 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 ZIM2Q9NZV7 527 aa10.94□□□□□ -0.66
LINC00339-203ENST00000420503 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 IGHV1-69-2A0A0G2JMI3 117 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 A0A0G2JMP0 313 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 A0A0X1KG70 313 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 PRSS23O95084 383 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 OPN1SWP03999 348 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ADORA3P0DMS8 318 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 OR8G3PP0DMU2 310 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ETS2P15036 469 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF250P15622 560 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 CDK6Q00534 326 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 PAGE3Q5JUK9 113 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 PRR31Q5SQ13 230 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 DCAF12L2Q5VW00 463 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 SLC35D2Q76EJ3 337 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 PXKQ7Z7A4 578 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 FUNDC1Q8IVP5 155 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF101Q8IZC7 436 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 BPIFB2Q8N4F0 458 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 SCAIQ8N9R8 606 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 CPEB3Q8NE35 698 aaKnown RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 OR4M2Q8NGB6 313 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 SYNPRQ8TBG9 265 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 DVL3Q92997 716 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 SLC35B4Q969S0 331 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 SLC47A1Q96FL8 570 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF48Q96MX3 618 aaPredicted RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 RMND5AQ9H871 391 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 MMP26Q9NRE1 261 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 TAS2R5Q9NYW4 299 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 VAPAQ9P0L0 249 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF346Q9UL40 294 aaKnown RBP10.93□□□□□ -0.66
LINC00339-203ENST00000420503 TANC2Q9HCD6 1990 aa10.93□□□□□ -0.66
LINC00339-203ENST00000420503 CMYA5Q8N3K9 4069 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM247A6NEH6 219 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 ZSCAN5BA6NJL1 495 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 TRPC5OSA6NMA1 111 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 UBDO15205 165 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 DHHO43323 396 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 SPRY3O43610 288 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 CH25HO95992 272 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 IGHV1-46P01743 117 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 WNT5AP41221 380 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 CRYBB2P43320 205 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 RAD52P43351 418 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 SEC61A1P61619 476 aaKnown RBP10.92□□□□□ -0.66
LINC00339-203ENST00000420503 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 FAM91A1Q658Y4 838 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 TMEM154Q6P9G4 183 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 C5orf46Q6UWT4 87 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 JAZF1Q86VZ6 243 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 LRRC18Q8N456 261 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 GPR32P1Q8NGA4 272 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 OR5J2Q8NH18 312 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 GEMIN6Q8WXD5 167 aaKnown RBP10.92□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF347Q96SE7 839 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 ZNF747Q9BV97 191 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 SUCNR1Q9BXA5 334 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 CDH20Q9HBT6 801 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 SLC52A3Q9NQ40 469 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 THAP1Q9NVV9 213 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 UBAP1Q9NZ09 502 aa10.92□□□□□ -0.66
LINC00339-203ENST00000420503 TESQ9UGI8 421 aaKnown RBP10.92□□□□□ -0.66
LINC00339-203ENST00000420503 NOTCH1P46531 2555 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 TRBV5-3A0A0A0MS03 114 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 IGKV1D-43A0A0B4J1Z2 117 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 DNAJC9-AS1A6NH13 148 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 CPSF4LA6NMK7 179 aaKnown RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 HMGB1P1B2RPK0 211 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 MMP7P09237 267 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-203ENST00000420503 QDPRP09417 244 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 PGA4P0DJD7 388 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
LINC00339-203ENST00000420503 CDAP32320 146 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms