RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 CCDC22O60826 627 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 RAD51DO75771 328 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 GPANK1O95872 356 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 LGI1O95970 557 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ITGA5P08648 1049 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 CD53P19397 219 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 GGT1P19440 569 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 GTF2E2P29084 291 aaKnown RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SEC24CP53992 1094 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 NR1H2P55055 460 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 CDH12P55289 794 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 FOXG1P55316 489 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 VEZF1Q14119 521 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 NRF1Q16656 503 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 DEFB113Q30KQ7 82 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TIMM23BQ5SRD1 257 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 FAM69AQ5T7M9 428 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM225Q6GV28 225 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ERICH5Q6P6B1 374 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF613Q6PF04 617 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 C5orf46Q6UWT4 87 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF704Q6ZNC4 412 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 CCDC80Q76M96 950 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 AAED1Q7RTV5 226 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ARPINQ7Z6K5 226 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 RBM45Q8IUH3 476 aaKnown RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 EPHX4Q8IUS5 362 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 P3H2Q8IVL5 708 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF433Q8N7K0 673 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ZIC4Q8N9L1 334 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 OR4D11Q8NGI4 311 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 OR6T1Q8NGN1 323 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 RP9Q8TA86 221 aaKnown RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 VANGL1Q8TAA9 524 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SLC26A7Q8TE54 656 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 HSD17B8Q92506 261 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SLC38A4Q969I6 547 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TAAR8Q969N4 342 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SLC25A36Q96CQ1 311 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SLC47A1Q96FL8 570 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SNX22Q96L94 193 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ZNF583Q96ND8 569 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 MCHR1Q99705 422 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM204Q9BSN7 226 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 MS4A7Q9GZW8 240 aaPredicted RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SLCO5A1Q9H2Y9 848 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 UBTD1Q9HAC8 227 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM27Q9HBJ8 222 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 PARPBPQ9NWS1 579 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 GID8Q9NWU2 228 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 ASB6Q9NWX5 421 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 TAS2R16Q9NYV7 291 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SELENONQ9NZV5 590 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 SEC14L4Q9UDX3 406 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 RASD1Q9Y272 281 aa6.07□□□□□ -1.44
HMGN1-205ENST00000419378 FLNAP21333 2647 aaKnown RBP6.07□□□□□ -1.44
HMGN1-205ENST00000419378 CIB4A0PJX0 185 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 OR5H1A6NKK0 313 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CPSF4LA6NMK7 179 aaKnown RBP6.06□□□□□ -1.44
HMGN1-205ENST00000419378 AIM2O14862 343 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CHP2O43745 196 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 OR2T1O43869 369 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 FAM20BO75063 409 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 VAMP5O95183 116 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 LYPD3O95274 346 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PLAUP00749 431 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 MT-ND5P03915 603 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 ELANEP08246 267 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 COX4I1P13073 169 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 TNFRSF1BP20333 461 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PTNP21246 168 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 DRD4P21917 467 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CBLP22681 906 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 GRPRP30550 384 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 LTBQ06643 244 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PMS2P11Q13670 270 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PPA1Q15181 289 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 ACKR1Q16570 336 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 ENTPD8Q5MY95 495 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 NCMAPQ5T1S8 102 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 TSPO2Q5TGU0 170 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 C9orf135Q5VTT2 229 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 WDR88Q6ZMY6 472 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CREB3L2Q70SY1 520 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 P2RY8Q86VZ1 359 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 CARM1Q86X55 608 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 KDM8Q8N371 416 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 OR2T12Q8NG77 320 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 OR6S1Q8NH40 331 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 RASSF5Q8WWW0 418 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PROX1Q92786 737 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 MUCL1Q96DR8 90 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 EPYCQ99645 322 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 TMEM43Q9BTV4 400 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 AMBRA1Q9C0C7 1298 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 FAM107BQ9H098 131 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 NSRP1Q9H0G5 558 aaKnown RBP6.06□□□□□ -1.44
HMGN1-205ENST00000419378 PCDHAC1Q9H158 963 aa6.06□□□□□ -1.44
HMGN1-205ENST00000419378 ESRP2Q9H6T0 727 aaKnown RBP6.06□□□□□ -1.44
HMGN1-205ENST00000419378 NGBQ9NPG2 151 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms