RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 RAB40ALP0C0E4 278 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 DRD5P21918 477 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 ZNF81P51508 661 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 PRAMEF9Q5VWM5 478 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 GLYATL2Q8WU03 294 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 PCOLCE2Q9UKZ9 415 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 LTBRP36941 435 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 RPL27P61353 136 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 RNASE10Q5GAN6 216 aaKnown RBP15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 TNFRSF13CQ96RJ3 184 aa15.46■□□□□ 0.07
SYNGAP1-202ENST00000418600 F5H0A9 414 aaPredicted RBP15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 ACVR1Q04771 509 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 TEX29Q8N6K0 151 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 OR10X1Q8NGY0 326 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 ALG14Q96F25 216 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 LIN37Q96GY3 246 aaPredicted RBP15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 SAP130Q9H0E3 1048 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 TMEM74BQ9NUR3 256 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 TP53TG5Q9Y2B4 290 aa15.46■□□□□ 0.06
SYNGAP1-202ENST00000418600 METTL15A6NJ78 407 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 PSMB10P40306 273 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 PGGHGQ32M88 737 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 ZNF791Q3KP31 576 aaPredicted RBP15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 COX14Q96I36 57 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 WDR54Q9H977 334 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 GALNT9Q9HCQ5 603 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 EPHA1P21709 976 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 GABRB3P28472 473 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 PPP1CAP62136 330 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 DNASE2BQ8WZ79 361 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 MSI2Q96DH6 328 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 MRI1Q9BV20 369 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 ST6GALNAC5Q9BVH7 336 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 SLCO1C1Q9NYB5 712 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 TIMM8BQ9Y5J9 83 aaPredicted RBP15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 SMIM30A4D0T7 59 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 SPINT1O43278 529 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 GDF9O60383 454 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 ACTL6AO96019 429 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 MEPCEQ7L2J0 689 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 LILRB2Q8N423 598 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 CNOT9Q92600 299 aaKnown RBP15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 EMC6Q9BV81 110 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 GPR45Q9Y5Y3 372 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 ARNTLO00327 626 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 MAGEA5P43359 124 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 SLC22A6Q4U2R8 563 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 RTL6Q6ICC9 239 aa15.45■□□□□ 0.06
SYNGAP1-202ENST00000418600 GLRA1P23415 457 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 CX3CR1P49238 355 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 USF2Q15853 346 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 LRRC10Q5BKY1 277 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 TMEM236Q5W0B7 351 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 KDM8Q8N371 416 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 C7orf50Q9BRJ6 194 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 POLE4Q9NR33 117 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 SLC22A11Q9NSA0 550 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 PIGLQ9Y2B2 252 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 TCHHQ07283 1943 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 GPNMBQ14956 572 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 NADK2Q4G0N4 442 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 SYT14P1Q58G82 188 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 CLDN23Q96B33 292 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 MAN2C1Q9NTJ4 1040 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 MDFIC2A0A1B0GVS7 189 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 ZNF732B4DXR9 585 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 GPX3P22352 226 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 ATXN7L3Q14CW9 347 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 OR1J1Q8NGS3 322 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 SLC45A3Q96JT2 553 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 RNF170Q96K19 258 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 SULT4A1Q9BR01 284 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 BARHL1Q9BZE3 327 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 GSG1Q2KHT4 349 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 HRASLS5Q96KN8 279 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 EIF5A2Q9GZV4 153 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 RNF212BA8MTL3 300 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 TMPRSS11DO60235 418 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 CREBL2O60519 120 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 HOXD4P09016 255 aaPredicted RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 H2AFB2P0C5Z0 115 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 DEFA4P12838 97 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 EXOSC6Q5RKV6 272 aaKnown RBP15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 THEM4Q5T1C6 240 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 OR14K1Q8NGZ2 314 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 GNRHR2Q96P88 292 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 ACOT13Q9NPJ3 140 aa15.44■□□□□ 0.06
SYNGAP1-202ENST00000418600 NDUFB3O43676 98 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 ABCD3P28288 659 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 SLC6A12P48065 614 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 HAGHLQ6PII5 290 aaPredicted RBP15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 CNIH3Q8TBE1 160 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 TMIGD2Q96BF3 282 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 OR11A1Q9GZK7 315 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 VAPAQ9P0L0 249 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 STUB1Q9UNE7 303 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 CYCSP99999 105 aaKnown RBP15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 GDF7Q7Z4P5 450 aa15.43■□□□□ 0.06
SYNGAP1-202ENST00000418600 P2RX6O15547 441 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms