RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 DHDHQ9UQ10 334 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 SLC22A23A1A5C7 686 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 OR6C68A6NDL8 312 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 GPX5O75715 221 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RPP14O95059 124 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 PRKAR1AP10644 381 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 PCSK6P29122 969 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 CDKN2AP42771 156 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 AP3S2P59780 193 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 GRB2P62993 217 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 MXD1Q05195 221 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ECH1Q13011 328 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 Q499Y3 187 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 PYDC2Q56P42 97 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 IDNKQ5T6J7 187 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 H3F3CQ6NXT2 135 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 C19orf48Q6RUI8 117 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ARSKQ6UWY0 536 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LYPD8Q6UX82 237 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 NCCRP1Q6ZVX7 275 aaPredicted RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 GALNT16Q8N428 558 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LRRC75AQ8NAA5 344 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 OR51L1Q8NGJ5 315 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 OTOSQ8NHW6 89 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 SETD6Q8TBK2 473 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 COX4I2Q96KJ9 171 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 FRMD6Q96NE9 622 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RNF32Q9H0A6 362 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 CENPMQ9NSP4 180 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 COL5A1P20908 1838 aaPredicted RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 SDK1Q7Z5N4 2213 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 C2orf72A6NCS6 295 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ANKRD61A6NGH8 418 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ACOD1A6NK06 481 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 LRRN3E7EW58 273 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 EIF1AYO14602 144 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 OGG1O15527 345 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 TCEA1P23193 301 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 GNALP38405 381 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 NBL1P41271 181 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 EGR4Q05215 589 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 BCL2L15Q5TBC7 163 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 DPPA2Q7Z7J5 298 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 ZBTB46Q86UZ6 589 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ADAMTS14Q8WXS8 1223 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 SPTSSAQ969W0 71 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 TBCCD1Q9NVR7 557 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 TAS2R5Q9NYW4 299 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RCE1Q9Y256 329 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 OR5H15A6NDH6 313 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 SCGNO76038 276 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 ACTL6AO96019 429 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 UBCP0CG48 685 aaKnown RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 CRYBB2P43320 205 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 GAS1P54826 345 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 AQP6Q13520 282 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 SSX1Q16384 188 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 MESTQ5EB52 335 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 FAM122BQ7Z309 247 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 COMMD2Q86X83 199 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 GHSRQ92847 366 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 DCBLD2Q96PD2 775 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 RSPO3Q9BXY4 272 aaPredicted RBP7.55□□□□□ -1.2
USP54-203ENST00000418501 OR2B2Q9GZK3 357 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 HHLA2Q9UM44 414 aa7.55□□□□□ -1.2
USP54-203ENST00000418501 TECTAO75443 2155 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 CD8B2A6NJW9 211 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 NOTOA8MTQ0 251 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 SELENOFO60613 162 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 CCL3P10147 92 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 CD8BP10966 210 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 BMXP51813 675 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 CLDN17P56750 224 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 OR12D2P58182 307 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 SCRN3Q0VDG4 424 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 MFAP5Q13361 173 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TEX30Q5JUR7 227 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 C16orf47Q6ZP98 133 aaPredicted RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 P4HA3Q7Z4N8 544 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 CDC20BQ86Y33 519 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ZADH2Q8N4Q0 377 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ULBP2Q9BZM5 246 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TMEM185BQ9H7F4 350 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ELOVL3Q9HB03 270 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 PI4KAP42356 2102 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TRAV17A0A0B4J275 112 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TVP23AA6NH52 213 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ITGB2P05107 769 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ZNF20P17024 532 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 OPRL1P41146 370 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 RPS18P62269 152 aaKnown RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 SLC10A1Q14973 349 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 POU4F3Q15319 338 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 ATCAYQ86WG3 371 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
USP54-203ENST00000418501 OR8B4Q96RC9 309 aa7.54□□□□□ -1.2
USP54-203ENST00000418501 TM9SF2Q99805 663 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms