RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 GIPRP48546 466 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 PTDSS1P48651 473 aaKnown RBP13.28□□□□□ -0.28
NUP50-204ENST00000417702 ZNF84P51523 738 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 RAB1AP62820 205 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 MXRA7P84157 204 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 HGFACQ04756 655 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 EFNB3Q15768 340 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 MST1LQ2TV78 715 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 NRMQ8IXM6 262 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 CDK20Q8IZL9 346 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 SLC22A24Q8N4F4 322 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 NOXO1Q8NFA2 376 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 MOSPD2Q8NHP6 518 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 ASB10Q8WXI3 467 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 HTRA1Q92743 480 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 NSL1Q96IY1 281 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 TMEM38BQ9NVV0 291 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 FBXO9Q9UK97 447 aaPredicted RBP13.28□□□□□ -0.28
NUP50-204ENST00000417702 SPEF1Q9Y4P9 236 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 FKBP7Q9Y680 259 aa13.28□□□□□ -0.28
NUP50-204ENST00000417702 J3KTA2 159 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 CSF3P09919 207 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 TSPAN19P0C672 248 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 SAGP10523 405 aaPredicted RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 NR2C1P13056 603 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 ACADSP16219 412 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 NPR2P20594 1047 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 THBS4P35443 961 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 RUNX1T1Q06455 604 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 SNTB2Q13425 540 aaKnown RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 DAG1Q14118 895 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 LAPTM4AQ15012 233 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 TAF11Q15544 211 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 ALG10Q5BKT4 473 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 GLYATQ6IB77 296 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 C16orf89Q6UX73 402 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 ZNF730Q6ZMV8 503 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 RRM2BQ7LG56 351 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 DPPA2Q7Z7J5 298 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 SKA3Q8IX90 412 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 RNF113BQ8IZP6 322 aaKnown RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 SYT14Q8NB59 555 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 MAPK1IP1LQ8NDC0 245 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 ACOT11Q8WXI4 607 aaPredicted RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 MCHR2Q969V1 340 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 MS4A3Q96HJ5 214 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 ZNF347Q96SE7 839 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 MRPL13Q9BYD1 178 aaKnown RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 PLK3Q9H4B4 646 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 MAN2C1Q9NTJ4 1040 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 EGFL7Q9UHF1 273 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 HIF3AQ9Y2N7 669 aa13.27□□□□□ -0.29
NUP50-204ENST00000417702 FAM32AQ9Y421 112 aaKnown RBP13.27□□□□□ -0.29
NUP50-204ENST00000417702 NPIPB13A6NJU9 1138 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 EFCAB9A8MZ26 197 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 NPIPB4C9JG80 1138 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 FFAR1O14842 300 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 TRMUO75648 421 aaKnown RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 F12P00748 615 aaPredicted RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 TP53P04637 393 aaPredicted RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 ZNF14P17017 642 aaPredicted RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 NR4A1P22736 598 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 PPP2R2BQ00005 443 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 MYBPC1Q00872 1141 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 GALK2Q01415 458 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 PRKCDQ05655 676 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 HIST3H3Q16695 136 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 ANKDD1AQ495B1 522 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 NRN1LQ496H8 165 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 ARMC4Q5T2S8 1044 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 KRT80Q6KB66 452 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 NIPBLQ6KC79 2804 aaeCLIP13.26□□□□□ -0.29
NUP50-204ENST00000417702 TMEM53Q6P2H8 277 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 PGAM4Q8N0Y7 254 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 ZNF525Q8N782 197 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 OR10H5Q8NGA6 315 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 FAM168AQ92567 244 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 VRK1Q99986 396 aaPredicted RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 TXNIPQ9H3M7 391 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 ANKRD19PQ9H560 264 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 RNF121Q9H920 327 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 ZNF224Q9NZL3 707 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 SAMD4AQ9UPU9 718 aaKnown RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 ENPP4Q9Y6X5 453 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 VPS13CQ709C8 3753 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 NF1P21359 2839 aa13.26□□□□□ -0.29
NUP50-204ENST00000417702 NSD1Q96L73 2696 aaPredicted RBP13.26□□□□□ -0.29
NUP50-204ENST00000417702 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 hCG_2039718K7EN88 272 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 MGRN1O60291 552 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SERPINA5P05154 406 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 ERCC1P07992 297 aaPredicted RBP13.25□□□□□ -0.29
NUP50-204ENST00000417702 PATE4P0C8F1 98 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 SLC25A16P16260 332 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 MAKP20794 623 aa13.25□□□□□ -0.29
NUP50-204ENST00000417702 CALB2P22676 271 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms