RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 RORBQ92753 470 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CORO2AQ92828 525 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CREB3L1Q96BA8 519 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 S100PBPQ96BU1 408 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 RBMXL1Q96E39 390 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 AURKBQ96GD4 344 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NOL4LQ96MY1 436 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 RNF157Q96PX1 679 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 OR1F2PQ96R84 312 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ADOQ96SZ5 270 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 DPH7Q9BTV6 452 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 GGACTQ9BVM4 153 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FGFBP2Q9BYJ0 223 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ALOXE3Q9BYJ1 711 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SRRQ9GZT4 340 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 ZNF385DQ9H6B1 395 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 REEP4Q9H6H4 257 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 KIR3DX1Q9H7L2 352 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 FN3KRPQ9HA64 309 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NMNAT1Q9HAN9 279 aaPredicted RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 BRF2Q9HAW0 419 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CACYBPQ9HB71 228 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 SAYSD1Q9NPB0 183 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 KLHL28Q9NXS3 571 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 NSMCE4AQ9NXX6 385 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 USE1Q9NZ43 259 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 CALML5Q9NZT1 146 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 VAPAQ9P0L0 249 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 DAPP1Q9UN19 280 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 MRPS18CQ9Y3D5 142 aaKnown RBP4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 GOLT1BQ9Y3E0 138 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 U3KQV3 271 aa4.92□□□□□ -1.62
ECHDC1-206ENST00000417628 GAGE12BA1L429 117 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM218A2RU14 115 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 GAGE12HA6NDE8 117 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CBY3A6NI87 242 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 E5RJQ4 531 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 SOCS2O14508 198 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 UBFD1O14562 309 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PRMT5O14744 637 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PIN1P1O15428 100 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ORC5O43913 435 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 LCMT2O60294 686 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 TPST1O60507 370 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CDC40O60508 579 aaKnown RBP eCLIP4.91□□□□□ -1.621e-6■□□□□ 9.9
ECHDC1-206ENST00000417628 FAM20BO75063 409 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 GGCTO75223 188 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 NXPH2O95156 264 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 DIRAS3O95661 229 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 IFNA17P01571 189 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 IGHV2-5P01817 119 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 SERPINA7P05543 415 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CSF3P09919 207 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 UMPSP11172 480 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 G6PDP11413 515 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ANXA3P12429 323 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 RAB3BP20337 219 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 BGNP21810 368 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 GABRR1P24046 479 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 FASP25445 335 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ACRV1P26436 265 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CNTFP26441 200 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PSMB6P28072 239 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 DDTP30046 118 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 S100A11P31949 105 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 POLR2IP36954 125 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 KLK7P49862 253 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 RAB5CP51148 216 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 RHOAP61586 193 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 RBX1P62877 108 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PITX1P78337 314 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 MRPS11P82912 194 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PDIA2Q13087 525 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PRKAA1Q13131 559 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 MAD2L1Q13257 205 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CEACAM7Q14002 265 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 GANABQ14697 944 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CARTPTQ16568 116 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 TIMM50Q3ZCQ8 353 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 FBXL19-AS1Q494R0 122 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 FASTKD1Q53R41 847 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PLAC9Q5JTB6 97 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ACER2Q5QJU3 275 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ACAD10Q6JQN1 1059 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 LCN8Q6JVE9 175 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 LRRC8EQ6NSJ5 796 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 RHBDD2Q6NTF9 364 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 TMEM107Q6UX40 140 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 SLC16A13Q7RTY0 426 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 PAGE2Q7Z2X7 111 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ZC3HC1Q86WB0 502 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 SVBPQ8N300 66 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ARRDC1Q8N5I2 433 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 ARIH2OSQ8N7S6 290 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 SYT14Q8NB59 555 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 MDS2Q8NDY4 140 aa4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 FAM83FQ8NEG4 500 aaPredicted RBP4.91□□□□□ -1.62
ECHDC1-206ENST00000417628 OR4C15Q8NGM1 316 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms