RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CLPTM1O96005 669 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 MSMBP08118 114 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 FAM157BP0CG42 384 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 GAAP10253 952 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 MAGEB1P43366 347 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 LMO4P61968 165 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 RBBP4Q09028 425 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 ALKBH6Q3KRA9 238 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 BEND6Q5SZJ8 279 aaPredicted RBP12.68□□□□□ -0.38
RPS28-201ENST00000417088 RGS7BPQ6MZT1 257 aaPredicted RBP12.68□□□□□ -0.38
RPS28-201ENST00000417088 TTC33Q6PID6 262 aaPredicted RBP12.68□□□□□ -0.38
RPS28-201ENST00000417088 TSPYL5Q86VY4 417 aaPredicted RBP12.68□□□□□ -0.38
RPS28-201ENST00000417088 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 ADAMTS16Q8TE57 1224 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 SLC25A44Q96H78 314 aaPredicted RBP12.68□□□□□ -0.38
RPS28-201ENST00000417088 ZNF416Q9BWM5 594 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 NANSQ9NR45 359 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 TAAR3PQ9P1P4 343 aa12.68□□□□□ -0.38
RPS28-201ENST00000417088 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 SLC22A23A1A5C7 686 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 KPNA4O00629 521 aaPredicted RBP12.67□□□□□ -0.38
RPS28-201ENST00000417088 RNF13O43567 381 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 ENTPD5O75356 428 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 QDPRP09417 244 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 CCL2P13500 99 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 MTPNP58546 118 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 SELPLGQ14242 412 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 CYP51A1Q16850 503 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 NKPD1Q17RQ9 610 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 AGBL2Q5U5Z8 902 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 DHDDSQ86SQ9 333 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 SEMA6DQ8NFY4 1073 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 VANGL1Q8TAA9 524 aaPredicted RBP12.67□□□□□ -0.38
RPS28-201ENST00000417088 TSPAN32Q96QS1 320 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 ZNF426Q9BUY5 554 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 RNF121Q9H920 327 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 HINT3Q9NQE9 182 aaKnown RBP12.67□□□□□ -0.38
RPS28-201ENST00000417088 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
RPS28-201ENST00000417088 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 GRIP1Q9Y3R0 1128 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 TENM1Q9UKZ4 2725 aa12.67□□□□□ -0.38
RPS28-201ENST00000417088 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 TRAPPC13A5PLN9 417 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 C17orf100A8MU93 164 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 FARS2O95363 451 aaKnown RBP12.66□□□□□ -0.38
RPS28-201ENST00000417088 BCL10O95999 233 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 ASAH2BP0C7U1 165 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 ZNF250P15622 560 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 CD247P20963 164 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 SELENOVP59797 346 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 HIST3H3Q16695 136 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 TMEM53Q6P2H8 277 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 SLC16A14Q7RTX9 510 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 DPPA2Q7Z7J5 298 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 DPP10Q8N608 796 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 OR51F2Q8NH61 342 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 SYNPRQ8TBG9 265 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 LRRC37BQ96QE4 947 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 CGREF1Q99674 301 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 SLC19A3Q9BZV2 496 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 OR51B6Q9H340 312 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 C1orf198Q9H425 327 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 CDH20Q9HBT6 801 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 ZNF229Q9UJW7 825 aa12.66□□□□□ -0.38
RPS28-201ENST00000417088 CDC14BO60729 498 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 SNAP29O95721 258 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 HIST1H2ABP04908 130 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 LCKP06239 509 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 UCP2P55851 309 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 KLF3P57682 345 aaPredicted RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 CCL8P80075 99 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 RUNX1T1Q06455 604 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 NRN1LQ496H8 165 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 TMEM154Q6P9G4 183 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 C12orf54Q6X4T0 127 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 HIST3H2AQ7L7L0 130 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 PATL1Q86TB9 770 aaKnown RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 ZNF519Q8TB69 540 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 ZFAND2BQ8WV99 257 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 C11orf40Q8WZ69 217 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 HIST1H2ACQ93077 130 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 MCHR2Q969V1 340 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 TAMM41Q96BW9 452 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 ZNF347Q96SE7 839 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 KAT8Q9H7Z6 458 aaKnown RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 MEPEQ9NQ76 525 aaPredicted RBP12.65□□□□□ -0.38
RPS28-201ENST00000417088 NKIRAS2Q9NYR9 191 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 GPR160Q9UJ42 338 aa12.65□□□□□ -0.38
RPS28-201ENST00000417088 TRIM33Q9UPN9 1127 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms