RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 NDUFS8O00217 210 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 DNPH1O43598 174 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 FKBP6O75344 327 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 SEC14L2O76054 403 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 VENTXO95231 258 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 THRBP10828 461 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 FKBP2P26885 142 aaKnown RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 THBS4P35443 961 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 YAP1P46937 504 aaKnown RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 ERFP50548 548 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 POLR2HP52434 150 aaKnown RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 MAP2K6P52564 334 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 TAS2R41P59536 307 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 ST3GAL3Q11203 375 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 PIN1Q13526 163 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 PAQR6Q6TCH4 344 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 KLHL24Q6TFL4 600 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 EPHX4Q8IUS5 362 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 KDM8Q8N371 416 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 CADM2Q8N3J6 435 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 SLC38A4Q969I6 547 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-202ENST00000416769 PRRC1Q96M27 445 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 SELENONQ9NZV5 590 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 RIMS3Q9UJD0 308 aa11.16□□□□□ -0.62
LINC00339-202ENST00000416769 TMEM129A0AVI4 362 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 AQP7P3A6NL99 342 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 J3KTA2 159 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 FFAR1O14842 300 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 WNT9BO14905 357 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 ZNF208O43345 1280 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 ENTPD5O75356 428 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 KRT36O76013 467 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 PRSS23O95084 383 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 WNT11O96014 354 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 THY1P04216 161 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 BMP4P12644 408 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 DAOP14920 347 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 HNF1AP20823 631 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 APEX1P27695 318 aaKnown RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 CFPP27918 469 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 HMGA2P52926 109 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 CDH12P55289 794 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 SMIM11AP58511 58 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 ELF3P78545 371 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 ALG10BQ5I7T1 473 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 SWT1Q5T5J6 900 aaKnown RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 ANKRD16Q6P6B7 361 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 LINC00114Q6XXX2 140 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 TSPYL5Q86VY4 417 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 MEX3DQ86XN8 651 aaKnown RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 PIK3C3Q8NEB9 887 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 DDIT4LQ96D03 193 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 SLC41A3Q96GZ6 507 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 MPP4Q96JB8 637 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 NAA11Q9BSU3 229 aaPredicted RBP11.15□□□□□ -0.62
LINC00339-202ENST00000416769 FNDC11Q9BVV2 318 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 TPK1Q9H3S4 243 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 NARFLQ9H6Q4 476 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 S100A14Q9HCY8 104 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 PARPBPQ9NWS1 579 aa11.15□□□□□ -0.62
LINC00339-202ENST00000416769 A0A087WUJ7 227 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 B9A039 149 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 KCNAB3O43448 404 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 TCF21O43680 179 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 CHP2O43745 196 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 EIF1BO60739 113 aaKnown RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 DIRAS1O95057 198 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 LYPD3O95274 346 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 CST1P01037 141 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 IGLV1-44P01699 117 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 PNMTP11086 282 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 FCGR1AP12314 374 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 CXCR1P25024 350 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 SRP14P37108 136 aaKnown RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 CLK1P49759 484 aaKnown RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 IDH3GP51553 393 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 TGFBR3Q03167 851 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 TRAM2Q15035 370 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 EFNB3Q15768 340 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 LIPNQ5VXI9 398 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 OR2T5Q6IEZ7 315 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 NIPAL3Q6P499 406 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 WDFY1Q8IWB7 410 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 OFCC1Q8IZS5 231 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 OR2T29Q8NH02 315 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 PYDC1Q8WXC3 89 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 DHRS1Q96LJ7 313 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 DOK1Q99704 481 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 PRSS27Q9BQR3 290 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 KATNB1Q9BVA0 655 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 ANKRD19PQ9H560 264 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 LPAR2Q9HBW0 351 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 NOX3Q9HBY0 568 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 CRNNQ9UBG3 495 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-202ENST00000416769 SLC7A7Q9UM01 511 aa11.14□□□□□ -0.63
LINC00339-202ENST00000416769 WNK2Q9Y3S1 2297 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms