RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SFTA3P0C7M3 94 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 LAMP2P13473 410 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC2A5P22732 501 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRSS3P35030 304 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 GPX4P36969 197 aaPredicted RBP13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 ADAM5Q6NVV9 412 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 RANBP3LQ86VV4 465 aaPredicted RBP13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 STEAP1Q9UHE8 339 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 HS3ST2Q9Y278 367 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 PPIL1Q9Y3C6 166 aa13.41□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A1B0GTH9 108 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRRT4C9JH25 899 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 IFNGP01579 166 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 CD2P06729 351 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2T7P0C7T2 308 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ELFN1P0C7U0 828 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 DAOP14920 347 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 AVPR2P30518 371 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 PRKAR1BP31321 381 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF345Q14585 488 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR1Q1Q15612 314 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ETFBKMTQ8IXQ9 262 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR5AP2Q8NGF4 316 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR2T27Q8NH04 317 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 RNF141Q8WVD5 230 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 RGP1Q92546 391 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 HIST1H2BAQ96A08 127 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZBTB8AQ96BR9 441 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC35A4Q96G79 324 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 SEBOXQ9HB31 216 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 RHOFQ9HBH0 211 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 MED31Q9Y3C7 131 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 PCYT1BQ9Y5K3 369 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A0A6YYC8 382 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 hCG_1809904A0A1W2PP81 198 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A1W2PR64 198 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A1W2PRV1 198 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 I3L1I5 382 aaPredicted RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF208O43345 1280 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ERI3O43414 337 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 XRCC3O43542 346 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 TBX19O60806 448 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 SNRNP70P08621 437 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 CALCBP10092 127 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 HIST1H1CP16403 213 aaKnown RBP13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 VAMP1P23763 118 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 SLC9A5Q14940 896 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 FAM78AQ5JUQ0 283 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNF813Q6ZN06 617 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 OR4K14Q8NGD5 310 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 C15orf40Q8WUR7 153 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 ZNRF4Q8WWF5 429 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 LMLNQ96KR4 655 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 TM7SF3Q9NS93 570 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 CALML5Q9NZT1 146 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
NCKIPSD-204ENST00000416649 A0A1W2PR48 441 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 C5orf51A6NDU8 294 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 EMC8O43402 210 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR8G3PP0DMU2 310 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 TPT1P13693 172 aaKnown RBP13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 NDUFS1P28331 727 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 RAB2AP61019 212 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 ILF3Q12906 894 aaKnown RBP eCLIP13.4□□□□□ -0.271e-6■■■■□ 22.8
NCKIPSD-204ENST00000416649 SKP2Q13309 424 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF124Q15973 351 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 GXYLT1Q4G148 440 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 FAM219AQ8IW50 185 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 DCUN1D4Q92564 292 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 MOAP1Q96BY2 351 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 Q96M85 177 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF346Q9UL40 294 aaKnown RBP13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 ATXN7L1Q9ULK2 861 aaPredicted RBP13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLC27A6Q9Y2P4 619 aa13.4□□□□□ -0.27
NCKIPSD-204ENST00000416649 DOCK9Q9BZ29 2069 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 HEXAP06865 529 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD63P08962 238 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ADH5P11766 374 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 CSNK2A2P19784 350 aaPredicted RBP13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD80P33681 288 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 SKP1P63208 163 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 PJVKQ0ZLH3 352 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 POU4F2Q12837 409 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 PON3Q15166 354 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 NR0B2Q15466 257 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 LIPNQ5VXI9 398 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 LCTLQ6UWM7 567 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF627Q7L945 461 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 SHISA5Q8N114 240 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 GABRG1Q8N1C3 465 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 GALNT16Q8N428 558 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 VN1R2Q8NFZ6 395 aa13.39□□□□□ -0.27
NCKIPSD-204ENST00000416649 FGF13Q92913 245 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms