RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 IPCEF1Q8WWN9 437 aaPredicted RBP7.46□□□□□ -1.22
RBM39-208ENST00000416108 MYDGFQ969H8 173 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 OR2M2Q96R28 347 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 KCNK17Q96T54 332 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SLCO5A1Q9H2Y9 848 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 C12orf49Q9H741 205 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 CHCHD3Q9NX63 227 aaKnown RBP7.46□□□□□ -1.22
RBM39-208ENST00000416108 UBAP1Q9NZ09 502 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 GLTPQ9NZD2 209 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SH3BGRL2Q9UJC5 107 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SNX5Q9Y5X3 404 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 COL6A6A6NMZ7 2263 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 MYO7BQ6PIF6 2116 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PKD1L2Q7Z442 2459 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 ESPL1Q14674 2120 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 A0A1W2PPL8 197 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MAGEA13PA6NCF6 341 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MBD3L4A6NDZ8 208 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 MBD3L3A6NE82 208 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 MBD3L5A6NJ08 208 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 EIF4E1BA6NMX2 242 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 PTGES3LE9PB15 166 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 SS18L1O75177 396 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 GYPBP06028 91 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 CRHP06850 196 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 RPSAP08865 295 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 QDPRP09417 244 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 TMIGD3P0DMS9 266 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 CLUP10909 449 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 DBTP11182 482 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 ZNF823P16415 610 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 PYCR1P32322 319 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 TIMP3P35625 211 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MTNR1AP48039 350 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 EFNB1P98172 346 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 GLO1Q04760 184 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 ZNF91Q05481 1191 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 RUNX1T1Q06455 604 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 FMODQ06828 376 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 SMN1Q16637 294 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 KCTD21Q4G0X4 260 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 ZNF362Q5T0B9 420 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 FAM214BQ7L5A3 538 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 BCDIN3DQ7Z5W3 292 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 C20orf196Q8IYI0 205 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 GCNT2Q8N0V5 402 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 UBE2J2Q8N2K1 259 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 ZIC4Q8N9L1 334 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 C9orf106Q8NAJ2 232 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 POMGNT2Q8NAT1 580 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 BBS1Q8NFJ9 593 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 OR6K3Q8NGY3 331 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MBD3L2Q8NHZ7 208 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 NSMAFQ92636 917 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 TMEM54Q969K7 222 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MCHR2Q969V1 340 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 RNFT2Q96EX2 444 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 MYCBPQ99417 103 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 CNN2Q99439 309 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 COPS4Q9BT78 406 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 RBM24Q9BX46 236 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 HCAR1Q9BXC0 346 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 LINC00470Q9BZP3 86 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 CCDC90BQ9GZT6 254 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 NUAK2Q9H093 628 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 RACGAP1Q9H0H5 632 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 VCX3AQ9NNX9 186 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 AMBNQ9NP70 447 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 PLCXD1Q9NUJ7 323 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 CNOT2Q9NZN8 540 aaKnown RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 PROCRQ9UNN8 238 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 B9D1Q9UPM9 204 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 ZNF835Q9Y2P0 537 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 POLR1DQ9Y2S0 133 aa7.45□□□□□ -1.22
RBM39-208ENST00000416108 NCOA6Q14686 2063 aaPredicted RBP7.45□□□□□ -1.22
RBM39-208ENST00000416108 CACNA1CQ13936 2221 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 CCDC182A6NF36 153 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 HSPB2A8KAH6 182 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 ZNF587BE7ETH6 402 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 DHHO43323 396 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 RGS10O43665 173 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 XPNPEP2O43895 674 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 ZNF432O94892 652 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 RAB36O95755 333 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 FADS2O95864 444 aaKnown RBP7.44□□□□□ -1.22
RBM39-208ENST00000416108 PIPP12273 146 aaPredicted RBP7.44□□□□□ -1.22
RBM39-208ENST00000416108 CTLA4P16410 223 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 MYL12AP19105 171 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 SLC2A5P22732 501 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 CRHBPP24387 322 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 LAP3P28838 519 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 GSTT1P30711 240 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 RAB40BQ12829 278 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 HSPB2Q16082 182 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 SLC25A47Q6Q0C1 308 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 NHLRC1Q6VVB1 395 aa7.44□□□□□ -1.22
RBM39-208ENST00000416108 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.44□□□□□ -1.22
RBM39-208ENST00000416108 NUFIP2Q7Z417 695 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms