RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 ACVR1Q04771 509 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF33BQ06732 778 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CD47Q08722 323 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 GPR50Q13585 617 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 VEZF1Q14119 521 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 GK2Q14410 553 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NPTX1Q15818 432 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZBTB6Q15916 424 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SSX2Q16385 188 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CTU2Q2VPK5 515 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TTLL9Q3SXZ7 439 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 VPS26BQ4G0F5 336 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 HSD17B12Q53GQ0 312 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 UNC50Q53HI1 259 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 EOGTQ5NDL2 527 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FFAR4Q5NUL3 377 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NKAIN2Q5VXU1 208 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ASPHD2Q6ICH7 369 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PRSS55Q6UWB4 352 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 EIF3MQ7L2H7 374 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 LUZP2Q86TE4 346 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CYP4Z1Q86W10 505 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TRIM69Q86WT6 500 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB43Q86YS6 212 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 KLHDC8AQ8IYD2 350 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM58AQ8N1B3 248 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 GTPBP8Q8N3Z3 284 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF149Q8NC42 400 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR5D13Q8NGL4 314 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MCOLN3Q8TDD5 553 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 GRHL3Q8TE85 626 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TWIST2Q8WVJ9 160 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PHYHIPQ92561 330 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 EMG1Q92979 244 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMBIM1Q969X1 311 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 C18orf25Q96B23 403 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 LURAP1Q96LR2 239 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RNF145Q96MT1 663 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPATA33Q96N06 139 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FOXN4Q96NZ1 517 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RAB40CQ96S21 281 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MYADMQ96S97 322 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MBOAT4Q96T53 435 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TBL1YQ9BQ87 522 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CHRDL1Q9BU40 450 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 STRADBQ9C0K7 418 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DERL2Q9GZP9 239 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SPATC1LQ9H0A9 340 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OPN3Q9H1Y3 402 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 WDR13Q9H1Z4 485 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 WDR76Q9H967 626 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ACOT13Q9NPJ3 140 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DYRK4Q9NR20 520 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CHRAC1Q9NRG0 131 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PNO1Q9NRX1 252 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZCCHC3Q9NUD5 404 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DCAF13Q9NV06 445 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OSER1Q9NX31 292 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ELOVL2Q9NXB9 296 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DPP3Q9NY33 737 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 TAS2R7Q9NYW3 318 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 MTCH1Q9NZJ7 389 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 OPTCQ9UBM4 332 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SEC14L4Q9UDX3 406 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 HACL1Q9UJ83 578 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 SAMD4AQ9UPU9 718 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 FOXA2Q9Y261 457 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 RBMX2Q9Y388 322 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PYGO1Q9Y3Y4 419 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CSNK1G3Q9Y6M4 447 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 CROCCQ5TZA2 2017 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 PTPRFP10586 1907 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 DICER1Q9UPY3 1922 aaKnown RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZNF646O15015 1829 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 NRCAMQ92823 1304 aa3.19□□□□□ -1.9
HMGB3P23-201ENST00000414981 A0A087WW49 117 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 LOC390937A0A1W2PQ73 354 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 A0A1W2PRB8 838 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TMEM89A2RUT3 159 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM149AA5PLN7 773 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 TUBAL3A6NHL2 446 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 OR6C70A6NIJ9 312 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 FAM220BPB1ANY3 271 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 H3BMM5 538 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 WWP2O00308 870 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 UBFD1O14562 309 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 GNGT2O14610 69 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ATP6V0E1O15342 81 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 AIREO43918 545 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 HCN1O60741 890 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PRAMEF11O60813 436 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 HUS1O60921 280 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 LRP3O75074 770 aa3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 PRKRAO75569 313 aaKnown RBP3.18□□□□□ -1.9
HMGB3P23-201ENST00000414981 ZFAND5O76080 213 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms