RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ZNF169Q14929 603 aaPredicted RBP13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 UBXN2BQ14CS0 331 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 CD226Q15762 336 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 ASPHD2Q6ICH7 369 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 RHOUQ7L0Q8 258 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 PRR22Q8IZ63 422 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 TMEM185AQ8NFB2 350 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 OR2G2Q8NGZ5 317 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 KXD1Q9BQD3 176 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 ZNF768Q9H5H4 540 aaKnown RBP13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 TMEM231Q9H6L2 316 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 APMAPQ9HDC9 416 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 LAMP5Q9UJQ1 280 aa13.23□□□□□ -0.29
SEMA3F-202ENST00000413852 GPRIN2O60269 458 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 APBB3O95704 486 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 HLA-DQA2P01906 255 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 MAOAP21397 527 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 MAP3K8P41279 467 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 KIR3DL2P43630 455 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 SRSF3P84103 164 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 BAMBIQ13145 260 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 OR7A5Q15622 319 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 CBLN2Q8IUK8 224 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 STEAP2Q8NFT2 490 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 NT5CQ8TCD5 201 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 C3orf49Q96BT1 292 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 CMBLQ96DG6 245 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 NMNAT2Q9BZQ4 307 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 TRIM2Q9C040 744 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 SLITRK2Q9H156 845 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 DCDC2BA2VCK2 349 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 XRCC3O43542 346 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PNPP00491 289 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 S1PR1P21453 382 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 TSFMP43897 325 aaKnown RBP13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 WDR38Q5JTN6 314 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 DPY19L2P2Q6ZN68 376 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 FAM220AQ7Z4H9 259 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PM20D2Q8IYS1 436 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 OR51A2Q8NGJ7 313 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 RAB40AQ8WXH6 277 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 RERGQ96A58 199 aaPredicted RBP13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 KTI12Q96EK9 354 aaPredicted RBP13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 MYADMQ96S97 322 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 ZNF416Q9BWM5 594 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 TMPRSS13Q9BYE2 586 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 EMC3Q9P0I2 261 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PLEKHA6Q9Y2H5 1048 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 OR4C45A6NMZ5 311 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 C4BPBP20851 252 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 DMWDQ09019 674 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 SERTAD2Q14140 314 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 STEAP1BQ6NZ63 245 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 ZNF321PQ8N8H1 164 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 ZNF471Q9BX82 626 aaPredicted RBP13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PRR13Q9NZ81 148 aa13.22□□□□□ -0.29
SEMA3F-202ENST00000413852 PTPRSQ13332 1948 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 NKX2-2O95096 273 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ABHD16AO95870 558 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 OR4E1P0C645 316 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 CSRP1P21291 193 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 GUCA2BQ16661 112 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 DMRTC1Q5HYR2 192 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ABHD13Q7L211 337 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 STACQ99469 402 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ZFYVE21Q9BQ24 234 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ERVK-19Q9WJR5 959 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 A0A087WUJ7 227 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 AMY2AP04746 511 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 CALCBP10092 127 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 AVPR2P30518 371 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 STARP49675 285 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ATP1B3P54709 279 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ENPP2Q13822 863 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 MESTQ5EB52 335 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 EXOSC6Q5RKV6 272 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 ZNF227Q86WZ6 799 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 BEST3Q8N1M1 668 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 CSNK1A1LQ8N752 337 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 RTN4RQ9BZR6 473 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 SLC7A5P2Q9GIP4 190 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 RSPH9Q9H1X1 276 aaPredicted RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 HPF1Q9NWY4 346 aa13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
SEMA3F-202ENST00000413852 SEC16AO15027 2179 aa13.21□□□□□ -0.3
SEMA3F-202ENST00000413852 ZNF254O75437 659 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 SLC25A12O75746 678 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 MPZL1O95297 269 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 FGF19O95750 216 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 RPS21P63220 83 aaKnown RBP13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 ALG10Q5BKT4 473 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
SEMA3F-202ENST00000413852 TDRD6O60522 2096 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms