RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 TBC1D3CQ6IPX1 549 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 PSRC1Q6PGN9 363 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 TTLL10Q6ZVT0 673 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 TBC1D3Q8IZP1 549 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 GLYATL2Q8WU03 294 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 RASD2Q96D21 266 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 GAL3ST4Q96RP7 486 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 ZDHHC5Q9C0B5 715 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 UQCC1Q9NVA1 299 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 CYP8B1Q9UNU6 501 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 AUP1Q9Y679 476 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 H2BFMP0C1H6 154 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 FAM157BP0CG42 384 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 F3P13726 295 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 BTCP35070 178 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 MAT1AQ00266 395 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 SSBP1Q04837 148 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 MRPL58Q14197 206 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 PRRT3Q5FWE3 981 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 PWWP2BQ6NUJ5 590 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 DPY19L4Q7Z388 723 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 FNDC9Q8TBE3 224 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 ZG16BQ96DA0 208 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 HHLA2Q9UM44 414 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 PQLC2LA1A4F0 135 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 LATO43561 262 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 ADH5P11766 374 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 PTGFRP43088 359 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 ZNF85Q03923 595 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 EXOSC7Q15024 291 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 LYG2Q86SG7 212 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 LRFN5Q96NI6 719 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 MARCH5Q9NX47 278 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 FAM96BQ9Y3D0 163 aa12.74□□□□□ -0.37
CLTCL1-201ENST00000412649 DICER1Q9UPY3 1922 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 FITM1A5D6W6 292 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 POM121BA6NF01 834 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ZNF749O43361 778 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ITGA5P08648 1049 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 CPMP14384 443 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 FOSL2P15408 326 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ATP1B3P54709 279 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 CCINQ13939 588 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 GNMTQ14749 295 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SOHLH1Q5JUK2 328 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SERINC2Q96SA4 455 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SDF2Q99470 211 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SPACA1Q9HBV2 294 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 EXOSC3Q9NQT5 275 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ZNF701Q9NV72 531 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 MT-ND4LP03901 98 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 HSD11B1P28845 292 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 POLR2GP62487 172 aaKnown RBP eCLIP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 DUSP8Q13202 625 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 MDGA2Q7Z553 956 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ZNF440Q8IYI8 595 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 C15orf54Q8N8G6 183 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 OR14C36Q8NHC7 312 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 CNRIP1Q96F85 164 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 NPDC1Q9NQX5 325 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ADAM18Q9Y3Q7 739 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 CKAP5Q14008 2032 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SLC2A5P22732 501 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 TUBG1P23258 451 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 DHRS2Q13268 280 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 GXYLT1Q4G148 440 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 VITQ6UXI7 678 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ADGRE4PQ86SQ3 457 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 OR2AJ1Q8NGZ0 328 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 PPP1R14AQ96A00 147 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SEC11CQ9BY50 192 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ZNF223Q9UK11 482 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 H7C1Q1 480 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 C2orf76Q3KRA6 126 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 OR4K15Q8NH41 348 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 DPP7Q9UHL4 492 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 PCYT1BQ9Y5K3 369 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 NPTNQ9Y639 398 aa12.73□□□□□ -0.37
CLTCL1-201ENST00000412649 SMCO3A2RU48 225 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 LDB3O75112 727 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 IL12BP29460 328 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 ACTR1BP42025 376 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 ACTR1AP61163 376 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 CSNK2A1P68400 391 aaPredicted RBP12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 ARHGAP11BQ3KRB8 267 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 DCAF12L2Q5VW00 463 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 FAM111BQ6SJ93 734 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 C5orf46Q6UWT4 87 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 CSNK2A3Q8NEV1 391 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 OR5M8Q8NGP6 311 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 PEX11GQ96HA9 241 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 MS4A4AQ96JQ5 239 aa12.72□□□□□ -0.37
CLTCL1-201ENST00000412649 WDR77Q9BQA1 342 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms