RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ZNF41P51814 821 aaPredicted RBP18.09■□□□□ 0.49
USP39-204ENST00000409766 HSPB2Q16082 182 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 PLPPR5Q32ZL2 321 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 TMEM105Q8N8V8 129 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 DTX3Q8N9I9 347 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 OR2G2Q8NGZ5 317 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 MR1Q95460 341 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 WACQ9BTA9 647 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 BRD7Q9NPI1 651 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 ANKRD10Q9NXR5 420 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 SLCO1C1Q9NYB5 712 aa18.09■□□□□ 0.49
USP39-204ENST00000409766 IGHV1-45A0A0A0MS14 117 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 A0A1B0GTH9 108 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 MEIOCA2RUB1 952 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 OR4C45A6NMZ5 311 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 LYRM1O43325 122 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 PRKAR1AP10644 381 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 SF3A2Q15428 464 aaKnown RBP18.08■□□□□ 0.49
USP39-204ENST00000409766 Q499Y3 187 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 OTPQ5XKR4 325 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 ZNF544Q6NX49 715 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 LRRC69Q6ZNQ3 347 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 ENKURQ8TC29 256 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 NSMAFQ92636 917 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 ABHD1Q96SE0 405 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 POTEKPQ9BYX7 375 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 ULBP3Q9BZM4 244 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 SMOC1Q9H4F8 434 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 SPATA2Q9UM82 520 aa18.08■□□□□ 0.49
USP39-204ENST00000409766 TRBV5-5A0A0J9YX44 114 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 FAM157BP0CG42 384 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 TFPIP10646 304 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 INPP5JQ15735 1006 aaPredicted RBP18.08■□□□□ 0.48
USP39-204ENST00000409766 LPAL2Q16609 132 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 MZT2BQ6NZ67 158 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 ZBTB8BQ8NAP8 495 aaPredicted RBP18.08■□□□□ 0.48
USP39-204ENST00000409766 POC1BQ8TC44 478 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 ASB10Q8WXI3 467 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 OR8B4Q96RC9 309 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 SLC25A18Q9H1K4 315 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 CHST11Q9NPF2 352 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 TEKT2Q9UIF3 430 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 PTRH2Q9Y3E5 179 aaKnown RBP18.08■□□□□ 0.48
USP39-204ENST00000409766 CACNA1CQ13936 2221 aa18.08■□□□□ 0.48
USP39-204ENST00000409766 KIF26BQ2KJY2 2108 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 A6NIZ1 184 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 NPIPB13A6NJU9 1138 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 LIPT2A6NK58 231 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 NPIPB4C9JG80 1138 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 PDCD5O14737 125 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 CRABP1P29762 137 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 RAP1BP61224 184 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 RAP1AP62834 184 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 PYHIN1Q6K0P9 492 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 SLC35D2Q76EJ3 337 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 PRSS35Q8N3Z0 413 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 DUSP18Q8NEJ0 188 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 ASB17Q8WXJ9 295 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 TRIM63Q969Q1 353 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 IMMP1LQ96LU5 166 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 THAP7Q9BT49 309 aaPredicted RBP18.07■□□□□ 0.48
USP39-204ENST00000409766 ZNF700Q9H0M5 742 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 RNF121Q9H920 327 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 FREM3P0C091 2139 aa18.07■□□□□ 0.48
USP39-204ENST00000409766 TEX51A0A1B0GUA7 166 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 IFITM5A6NNB3 132 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 H3BML4 177 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 LANCL1O43813 399 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ITGA10O75578 1167 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 CELA2AP08217 269 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 IFNGR1P15260 489 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 MAPK3P27361 379 aaPredicted RBP18.06■□□□□ 0.48
USP39-204ENST00000409766 INPP1P49441 399 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 DAP3P51398 398 aaKnown RBP18.06■□□□□ 0.48
USP39-204ENST00000409766 TLE3Q04726 772 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 MEP1BQ16820 701 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 FDX2Q6P4F2 183 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 DTWD2Q8NBA8 298 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 OR2M3Q8NG83 312 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 CHCHD2Q9Y6H1 151 aaPredicted RBP18.06■□□□□ 0.48
USP39-204ENST00000409766 TMEM212A6NML5 194 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 C9J4A7 227 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 AIPO00170 330 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 SLC43A1O75387 559 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 GP1BAP07359 652 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 COX6A1P12074 109 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ADAM8P78325 824 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ROM1Q03395 351 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 GLO1Q04760 184 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 SLC17A1Q14916 467 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 SLC18B1Q6NT16 456 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 LRRN1Q6UXK5 716 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 WDFY1Q8IWB7 410 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ZNF679Q8IYX0 411 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 RFT1Q96AA3 541 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 DCBLD2Q96PD2 775 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 HDHD2Q9H0R4 259 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ELOVL3Q9HB03 270 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 FANCFQ9NPI8 374 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 ALKBH4Q9NXW9 302 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms