RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 AGAP5A6NIR3 686 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CD5LO43866 347 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 PRKYO43930 277 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 NDUFS7O75251 213 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 OR5F1O95221 314 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 HSMCR30P0CW71 290 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 TAS2R41P59536 307 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 PRKCDQ05655 676 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 ST3GAL3Q11203 375 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 SSX1Q16384 188 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 DECR1Q16698 335 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 ARHGAP11BQ3KRB8 267 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 EXOSC6Q5RKV6 272 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 FRRS1Q6ZNA5 592 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 ATG4DQ86TL0 474 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 GGNQ86UU5 652 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 VRK2Q86Y07 508 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 NANOGP1Q8N7R0 232 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 OR7G2Q8NG99 324 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 OR52P1PQ8NH57 321 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 DUSP19Q8WTR2 217 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CHCHD6Q9BRQ6 235 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CDADC1Q9BWV3 514 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 PRRG3Q9BZD7 231 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 POLR2J2Q9GZM3 115 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 MTHFD2LQ9H903 347 aaPredicted RBP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 CACYBPQ9HB71 228 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 EQTNQ9NQ60 294 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 SEC14L4Q9UDX3 406 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 ANK2Q01484 3957 aa11.26□□□□□ -0.61
CHRNA1-205ENST00000409542 A0A087WV62 115 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ISPDA4D126 451 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SNTNA6NMZ2 147 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 AP3D1O14617 1153 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 GMFGO60234 142 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 NTN1O95631 604 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 RAB36O95755 333 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 OPN1LWP04000 364 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 DANCRP0C864 163 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 RPS4XP62701 263 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PSG6Q00889 435 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 IFITM3Q01628 133 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF45Q02386 682 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 MLLT11Q13015 90 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SPHARQ15513 63 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TSC22D1Q15714 1073 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 KLHL22Q53GT1 634 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SYT14P1Q58G82 188 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ALKBH2Q6NS38 261 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 MARCH3Q86UD3 253 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PEX5LQ8IYB4 626 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 IQCF1Q8N6M8 205 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PIGXQ8TBF5 258 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TEX47Q8TBZ9 253 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TMEM163Q8TC26 289 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 C1GALT1C1Q96EU7 318 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF582Q96NG8 517 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 GPA33Q99795 319 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ACTR6Q9GZN1 396 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 HHATLQ9HCP6 504 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TESQ9UGI8 421 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 C19orf53Q9UNZ5 99 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF443Q9Y2A4 671 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 CHST2Q9Y4C5 530 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PEX16Q9Y5Y5 336 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 A0A075B6Q4 140 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TLX2O43763 284 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 KIAA0513O60268 411 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 GPRIN2O60269 458 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TPST2O60704 377 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TMCC2O75069 709 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ADAM11O75078 769 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 IGHV4-39P01824 125 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 THBS1P07996 1170 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PPP3CBP16298 524 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 FPR3P25089 353 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SOX6P35712 828 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ETV6P41212 452 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 OMPP47874 163 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PSMD7P51665 324 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 RGS8P57771 180 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 C1DQ13901 141 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 FGFBP1Q14512 234 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SGCBQ16585 318 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF181Q2M3W8 571 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TMEM44Q2T9K0 475 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ACSM5Q6NUN0 579 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SLC27A4Q6P1M0 643 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZCCHC12Q6PEW1 402 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF730Q6ZMV8 503 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 DNM1P46Q6ZS02 220 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 HMGN2P46Q86SG4 172 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 OR52I1Q8NGK6 324 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 OR6K3Q8NGY3 331 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ACOT11Q8WXI4 607 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms