RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 C19orf84I3L1E1 186 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 DVL2O14641 736 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 TNFSF13O75888 250 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 RENP00797 406 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 PGA4P0DJD7 388 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 PGA3P0DJD8 388 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 PAICSP22234 425 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 GGT2P36268 569 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 OR3A2P47893 321 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 SELENOPP49908 381 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 SNAPC1Q16533 368 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 SLC25A35Q3KQZ1 300 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 MESTQ5EB52 335 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 NUFIP2Q7Z417 695 aaKnown RBP14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 TMEM123Q8N131 208 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 DEPDC4Q8N2C3 294 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 NAXEQ8NCW5 288 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 NOXO1Q8NFA2 376 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 OR52E2Q8NGJ4 325 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 OR6N1Q8NGY5 312 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 RBP7Q96R05 134 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 ZNF184Q99676 751 aaPredicted RBP14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 APOL4Q9BPW4 351 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 LINC00470Q9BZP3 86 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 SLCO5A1Q9H2Y9 848 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 PIGMQ9H3S5 423 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 C12orf49Q9H741 205 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 IMPAD1Q9NX62 359 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 PROCRQ9UNN8 238 aa14.61□□□□□ -0.07
TSPAN4-208ENST00000409531 TEP1Q99973 2627 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 PRSS37A4D1T9 235 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 M0R3G1 203 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 SURF4O15260 269 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 TRMUO75648 421 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 KRT33AO76009 404 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 CNOT4O95628 575 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 CSNK1A1P48729 337 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 ADARB1P78563 741 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 CD47Q08722 323 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 FOXF2Q12947 444 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 IL18R1Q13478 541 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 THEM4Q5T1C6 240 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 CARD17Q5XLA6 110 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 LEG1Q6P5S2 330 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 ABHD12BQ7Z5M8 362 aaPredicted RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 GPR137CQ8N3F9 429 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 SETD9Q8NE22 299 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 OR4K13Q8NH42 304 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 FAM81AQ8TBF8 368 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 TRUB1Q8WWH5 349 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 KCNK17Q96T54 332 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 MRPL13Q9BYD1 178 aaKnown RBP14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 FN3KQ9H479 309 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 PLSCR4Q9NRQ2 329 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 UPB1Q9UBR1 384 aa14.6□□□□□ -0.07
TSPAN4-208ENST00000409531 MPZL2O60487 215 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 CD8BP10966 210 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 NTF4P34130 210 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 CDKN2AP42771 156 aaKnown RBP14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 PCYT1AP49585 367 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 RUNX1T1Q06455 604 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 TFF3Q07654 80 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 VWA1Q6PCB0 445 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 TFAP2EQ6VUC0 442 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 PTCHD4Q6ZW05 846 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 C20orf196Q8IYI0 205 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 UBE2J2Q8N2K1 259 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 SDR9C7Q8NEX9 313 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 OR8J1Q8NGP2 316 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 TFAP2CQ92754 450 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 HDAC2Q92769 488 aaKnown RBP14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 MARVELD3Q96A59 401 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 STARD4Q96DR4 205 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 NMNAT3Q96T66 252 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 SPOCK3Q9BQ16 436 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 ASB6Q9NWX5 421 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 GLTPQ9NZD2 209 aa14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 VSX1Q9NZR4 365 aaPredicted RBP14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 FOXD3Q9UJU5 478 aaPredicted RBP14.59□□□□□ -0.07
TSPAN4-208ENST00000409531 PKDREJQ9NTG1 2253 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 SLC22A23A1A5C7 686 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 PRR23D1E9PI22 279 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 PRR23D2P0DMB1 279 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 COX6B1P14854 86 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 BMP5P22003 454 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 CRABP1P29762 137 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 HIST3H3Q16695 136 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 ZNF362Q5T0B9 420 aaPredicted RBP14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 FBXW9Q5XUX1 488 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 CRYBG3Q68DQ2 2970 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 DNM1P34Q6PK57 102 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 BEND4Q6ZU67 534 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 BTLAQ7Z6A9 289 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 SYT14Q8NB59 555 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 ACBD4Q8NC06 268 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 SLC37A3Q8NCC5 494 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 NPEPL1Q8NDH3 523 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 TMEM54Q969K7 222 aa14.58□□□□□ -0.08
TSPAN4-208ENST00000409531 ULBP2Q9BZM5 246 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms