RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KRT33AO76009 404 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 RGS11O94810 467 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 IFNA7P01567 189 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SPI1P17947 270 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 MAP3K8P41279 467 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SLC6A9P48067 706 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 FNTBP49356 437 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 LGALSLQ3ZCW2 172 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 CD276Q5ZPR3 534 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 S100A16Q96FQ6 103 aaKnown RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 FXYD6Q9H0Q3 95 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 ABRACLQ9P1F3 81 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 CAMK2AQ9UQM7 478 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 PEX14O75381 377 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 ZFPL1O95159 310 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 CFDP00746 253 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SLC35E2P0CK97 266 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 GP1BBP13224 206 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 IL11P20809 199 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 POU3F1Q03052 451 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 POU4F2Q12837 409 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 CEBPEQ15744 281 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 GRK1Q15835 563 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SLC22A10Q63ZE4 541 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 SLC29A4Q7RTT9 530 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 OR56B4Q8NH76 319 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 COQ8AQ8NI60 647 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 UBL7Q96S82 380 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 NOX3Q9HBY0 568 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 HRASLSQ9HDD0 168 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 DNAJB12Q9NXW2 375 aaKnown RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 VSX1Q9NZR4 365 aaPredicted RBP12.16□□□□□ -0.46
COL6A2-204ENST00000409416 UBQLN2Q9UHD9 624 aa12.16□□□□□ -0.46
COL6A2-204ENST00000409416 FOXS1O43638 330 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 PTP4A3O75365 173 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ATP1B1P05026 303 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 PLAURQ03405 335 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RIN1Q13671 783 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 TCTE1Q5JU00 501 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 C9orf135Q5VTT2 229 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 BTN2A1Q7KYR7 527 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 NLRC3Q7RTR2 1065 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF550Q7Z398 422 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF248Q8NDW4 579 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 TNFAIP8L1Q8WVP5 186 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 NARS2Q96I59 477 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 OR6C1Q96RD1 312 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RTN4RQ9BZR6 473 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF436Q9C0F3 470 aaPredicted RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ATG5Q9H1Y0 275 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 V9GY05 133 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 KIR2DS5A0A0G2JLQ3 304 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 A0A0G2JNG1 304 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 KIR2DS3K7RE56 304 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 L7N2F9 121 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 CTNSO60931 367 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ITGA10O75578 1167 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RENP00797 406 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 PDGFAP04085 211 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RFC3P40938 356 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 MNDAP41218 407 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 PTH2RP49190 550 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 SNU13P55769 128 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 CAMK2DQ13557 499 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 KIR2DS5Q14953 304 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 C4orf46Q504U0 113 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 UBE2NLQ5JXB2 153 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RPL22L1Q6P5R6 122 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 IDO2Q6ZQW0 420 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RTL10Q7L3V2 364 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 GLRX5Q86SX6 157 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ELOVL3Q9HB03 270 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 DLL4Q9NR61 685 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 A0A1W2PPC4 97 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 FITM1A5D6W6 292 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ARPC5O15511 151 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 ZNF264O43296 627 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 KCNJ13O60928 360 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 LYPD3O95274 346 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 PSMB1P20618 241 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 DNASE1L1P49184 302 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 MMP15P51511 669 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 CCR9P51686 369 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 NANOS3P60323 173 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 RPS15P62841 145 aaKnown RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 CD163Q86VB7 1156 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 WDR89Q96FK6 387 aaPredicted RBP12.15□□□□□ -0.46
COL6A2-204ENST00000409416 GPER1Q99527 375 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 METTL7AQ9H8H3 244 aa12.15□□□□□ -0.46
COL6A2-204ENST00000409416 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 METTL12A8MUP2 240 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 HEXBP07686 556 aa12.14□□□□□ -0.47
COL6A2-204ENST00000409416 CDK2P24941 298 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms