RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ANGPT4Q9Y264 503 aa4.96□□□□□ -1.62
CLK1-202ENST00000409403 DLGAP4Q9Y2H0 992 aa4.96□□□□□ -1.62
CLK1-202ENST00000409403 KCNIP3Q9Y2W7 256 aa4.96□□□□□ -1.62
CLK1-202ENST00000409403 ANKRD12Q6UB98 2062 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 A0A1B0GV90 55 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 MEX3AA1L020 520 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 RFPL4AA6NLU0 287 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 RFPL4AL1F8VTS6 287 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 FAM72CH0Y354 149 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 H3BN98 237 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TCAPO15273 167 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 BCL2L11O43521 198 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 LANCL1O43813 399 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 PRKRAO75569 313 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 RBBP9O75884 186 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 IFNA17P01571 189 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 MBP02144 154 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 IL3P08700 152 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 APEHP13798 732 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 PKMP14618 531 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 AGAP20933 346 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 GSTM3P21266 225 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ITGA3P26006 1051 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ABCD3P28288 659 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 CCR7P32248 378 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ETV5P41161 510 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 CXCR3P49682 368 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 SMSP52788 366 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 HSD17B7P56937 341 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 DAOAP59103 153 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TAS2R43P59537 309 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 PPIAP62937 165 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 PPA1Q15181 289 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 MAPK14Q16539 360 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 GGTA1PQ4G0N0 100 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ACER2Q5QJU3 275 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 MANEAQ5SRI9 462 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ARMC12Q5T9G4 340 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 FAM72AQ5TYM5 149 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 OLFML2AQ68BL7 652 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 FAM72DQ6L9T8 149 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 LPCAT3Q6P1A2 487 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 SFXN4Q6P4A7 337 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 CRIP3Q6Q6R5 217 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ZNF621Q6ZSS3 439 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ZNF627Q7L945 461 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 DPPA2Q7Z7J5 298 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TMEM200AQ86VY9 491 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ANKRD46Q86W74 232 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 FAM72BQ86X60 149 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ANGPTL5Q86XS5 388 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ZFP82Q8N141 532 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TRMT10AQ8TBZ6 339 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 ACOT11Q8WXI4 607 aaPredicted RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 SORCS1Q8WY21 1168 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 HSD17B8Q92506 261 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 CXorf40BQ96DE9 158 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 MALSU1Q96EH3 234 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 SENP5Q96HI0 755 aaPredicted RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 MS4A4EQ96PG1 132 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 GPR21Q99679 349 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 WDR77Q9BQA1 342 aaPredicted RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 ZNF559Q9BR84 538 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 RIOK2Q9BVS4 552 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 ADGRE3Q9BY15 652 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 NCOR1P1Q9H4R4 102 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TUBA4BQ9H853 241 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 TPT1P8Q9HAU6 139 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 SLC6A13Q9NSD5 602 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ACSS1Q9NUB1 689 aaPredicted RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 ACER3Q9NUN7 267 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 NLE1Q9NVX2 485 aaPredicted RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 GAR1Q9NY12 217 aaKnown RBP4.95□□□□□ -1.62
CLK1-202ENST00000409403 PTGFRNQ9P2B2 879 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 FBXL4Q9UKA2 621 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 ENTPD2Q9Y5L3 495 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 PIAS3Q9Y6X2 628 aa4.95□□□□□ -1.62
CLK1-202ENST00000409403 EML5Q05BV3 1969 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ITPR2Q14571 2701 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 METTL21EPA6NDL7 271 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 A6NLC8 198 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 GABRR3A8MPY1 467 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 GFYI3L273 518 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 M0R129 80 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 LDB2O43679 373 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MT-CO3P00414 261 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 F10P00742 488 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 IGHV2-5P01817 119 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MT-ND4P03905 459 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 EIF4EP06730 217 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 ADRA2AP08913 450 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 ALPIP09923 528 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 TDGF1P13385 188 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 COX7A2P14406 83 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MUC1P15941 1255 aaPredicted RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 RCC1P18754 421 aaPredicted RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 UQCRC2P22695 453 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 RPL3P39023 403 aaKnown RBP4.94□□□□□ -1.62
CLK1-202ENST00000409403 HTR5AP47898 357 aa4.94□□□□□ -1.62
CLK1-202ENST00000409403 MTNR1AP48039 350 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms