RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 TRAV8-7A0A075B6U6 113 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 NAP1L6A6NFF2 107 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 KHDRBS3O75525 346 aaKnown RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 OR6A2O95222 327 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ANGPT1Q15389 498 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 CREB3L2Q70SY1 520 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 FGD2Q7Z6J4 655 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 CDH24Q86UP0 819 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ADGRG3Q86Y34 549 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 SLC25A45Q8N413 288 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 C9orf62Q8N4C0 152 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 OR10AC1Q8NH08 325 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ASB17Q8WXJ9 295 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 TMEM106AQ96A25 262 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 OR8B4Q96RC9 309 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 TXNIPQ9H3M7 391 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 BCAT2O15382 392 aaPredicted RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 DXOO77932 396 aaKnown RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 AHSA1O95433 338 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 MAS1P04201 325 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 CDK2P24941 298 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 MNDAP41218 407 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 KIR3DL2P43630 455 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 AFF3P51826 1226 aaKnown RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 BLVRAP53004 296 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 GALK2Q01415 458 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ST3GAL2Q16842 350 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 WDR38Q5JTN6 314 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 FDX2Q6P4F2 183 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 LUZP2Q86TE4 346 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ZNF227Q86WZ6 799 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 STK35Q8TDR2 534 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 C15orf40Q8WUR7 153 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 THRSPQ92748 146 aa15.2■□□□□ 0.02
NUP50-203ENST00000407019 ZNF768Q9H5H4 540 aaKnown RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 RANBP3Q9H6Z4 567 aaPredicted RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 VSX1Q9NZR4 365 aaPredicted RBP15.2■□□□□ 0.02
NUP50-203ENST00000407019 GPR171O14626 319 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 GMDSO60547 372 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 SLC16A7O60669 478 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 IGHMP01871 453 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 SCAND1P57086 179 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 INSM1Q01101 510 aaPredicted RBP15.19■□□□□ 0.02
NUP50-203ENST00000407019 MEP1BQ16820 701 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 ODF4Q2M2E3 257 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 SFRP4Q6FHJ7 346 aaPredicted RBP15.19■□□□□ 0.02
NUP50-203ENST00000407019 WDR74Q6RFH5 385 aaPredicted RBP15.19■□□□□ 0.02
NUP50-203ENST00000407019 SHISA6Q6ZSJ9 500 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 COX15Q7KZN9 410 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 KANSL1Q7Z3B3 1105 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 OR51A4Q8NGJ6 313 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 DUSP19Q8WTR2 217 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 DNASE2BQ8WZ79 361 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 ULBP3Q9BZM4 244 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 ELOVL3Q9HB03 270 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 EMC3Q9P0I2 261 aa15.19■□□□□ 0.02
NUP50-203ENST00000407019 IGLV1-36A0A0B4J1U3 117 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 PLPP3O14495 311 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 PEX14O75381 377 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 LDOC1O95751 146 aaPredicted RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 SPARCP09486 303 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SDHBP21912 280 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 TAS2R20P59543 309 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 RPS15P62841 145 aaKnown RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 SLC17A1Q14916 467 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ELFN2Q5R3F8 820 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SLC18B1Q6NT16 456 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 C5orf46Q6UWT4 87 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SLC35D2Q76EJ3 337 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 BEST4Q8NFU0 473 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 TSEN15Q8WW01 171 aaKnown RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 ATOH1Q92858 354 aaPredicted RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 FOXN4Q96NZ1 517 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 NUDT22Q9BRQ3 303 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 NKIRAS2Q9NYR9 191 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 PTTG3PQ9NZH4 202 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 KLK11Q9UBX7 282 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SRPK3Q9UPE1 567 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 IGHV3-20A0A0C4DH32 117 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ANKRD20A5PA0PJZ0 165 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 H3BSH0 61 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ACOT7O00154 380 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ALX3O95076 343 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 GIMD1P0DJR0 217 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SULT1A3P0DMM9 295 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SULT1A4P0DMN0 295 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 CXCL3P19876 107 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 STARD6P59095 220 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 RNF4P78317 190 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SMAD2Q15796 467 aaKnown RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 COL28A1Q2UY09 1125 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 OTPQ5XKR4 325 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 OLFML2AQ68BL7 652 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ZNF767PQ75MW2 155 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.18■□□□□ 0.02
NUP50-203ENST00000407019 MISPQ8IVT2 679 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ZNF679Q8IYX0 411 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 SIX5Q8N196 739 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 OR8K3Q8NH51 312 aa15.18■□□□□ 0.02
NUP50-203ENST00000407019 ZNF431Q8TF32 576 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms