RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ART1P52961 327 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ARPC4P59998 168 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FAPQ12884 760 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 RSU1Q15404 277 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 VHLLQ6RSH7 139 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MDGA2Q7Z553 956 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 TMEM17Q86X19 198 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ARMC10Q8N2F6 343 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 Q8N402 240 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ACOT12Q8WYK0 555 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FAM46BQ96A09 425 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZC3H10Q96K80 434 aaKnown RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 ALKBH3Q96Q83 286 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 CLEC4MQ9H2X3 399 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 DUSP21Q9H596 190 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 PAIP2BQ9ULR5 123 aaKnown RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 PCDHGA1Q9Y5H4 931 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 A0A1B0GVC2 190 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 A6NIN4 97 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FIGNL2A6NMB9 653 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FFAR1O14842 300 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 RBBP9O75884 186 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 RAB3AP20336 220 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 LIPAP38571 399 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CASP3P42574 277 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 PITPNBP48739 271 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 TEKQ02763 1124 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 EMC4Q5J8M3 183 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 C1QL3Q5VWW1 255 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 SLC46A3Q7Z3Q1 461 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 TMED4Q7Z7H5 227 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZNF611Q8N823 705 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 GJC3Q8NFK1 279 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 OR5D14Q8NGL3 314 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 OR5M9Q8NGP3 310 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 OR13F1Q8NGS4 319 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 OR4Q3Q8NH05 313 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 OR52N1Q8NH53 320 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MIB2Q96AX9 1013 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MED28Q9H204 178 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZNF71Q9NQZ8 489 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 PRMT8Q9NR22 394 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 CDC42EP2O14613 210 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CCNKO75909 580 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 HTR3BO95264 441 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 IL2RAP01589 272 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 SCG5P05408 212 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 GABRA5P31644 462 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ETV5P41161 510 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CBX5P45973 191 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ETV1P50549 477 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 IL10RAQ13651 578 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 SPCS2Q15005 226 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 PIGCQ92535 297 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 RFT1Q96AA3 541 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ARL5BQ96KC2 179 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 MOGAT1Q96PD6 335 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CENPOQ9BU64 300 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 BEX2Q9BXY8 128 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 CST11Q9H112 138 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 ZNF442Q9H7R0 627 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 AKIRIN1Q9H9L7 192 aaPredicted RBP8.23□□□□□ -1.09
LIG4-202ENST00000405925 BEX1Q9HBH7 125 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 FLRT3Q9NZU0 649 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 HS3ST3B1Q9Y662 390 aa8.23□□□□□ -1.09
LIG4-202ENST00000405925 TRAV18A0A075B6X5 111 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 TRABD2BA6NFA1 517 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 GATBO75879 557 aaKnown RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 THBS2P35442 1172 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 LSM11P83369 360 aaKnown RBP eCLIP8.22□□□□□ -1.09
LIG4-202ENST00000405925 P2RY14Q15391 338 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SLC22A6Q4U2R8 563 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SLC25A24Q6NUK1 477 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SERPINA12Q8IW75 414 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 HPS1Q92902 700 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 PAQR5Q9NXK6 330 aaPredicted RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 NUFIP1Q9UHK0 495 aaKnown RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 SPEF1Q9Y4P9 236 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 MRPS18BQ9Y676 258 aaKnown RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 V9GY05 133 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 RTTNQ86VV8 2226 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 HEATR5BQ9P2D3 2071 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OR2M5A3KFT3 312 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 TMEM212A6NML5 194 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ZNF701M0R085 212 aaPredicted RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 P2RY10O00398 339 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ITGB2P05107 769 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 MSR1P21757 451 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 GPR50Q13585 617 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 C4orf46Q504U0 113 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ZNF574Q6ZN55 896 aaPredicted RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 ZNF615Q8N8J6 731 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 FCAMRQ8WWV6 532 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OR14A2Q96R54 314 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SPSB2Q99619 263 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 FUZQ9BT04 418 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms