RNA–Protein interactions for RNA: ENST00000405636.6

TOMM40-202, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-202ENST00000405636 UPK3AO75631 287 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 APOL3O95236 402 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 CSNK1A1P48729 337 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 CDH11P55287 796 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 RPS7P62081 194 aaKnown RBP23.1■■□□□ 1.29
TOMM40-202ENST00000405636 SLC25A30Q5SVS4 291 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 B3GNT6Q6ZMB0 384 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 HDDC2Q7Z4H3 204 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 NAXEQ8NCW5 288 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 OR6N1Q8NGY5 312 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 NSMAFQ92636 917 aa23.1■■□□□ 1.29
TOMM40-202ENST00000405636 GMPPAQ96IJ6 420 aaPredicted RBP23.1■■□□□ 1.29
TOMM40-202ENST00000405636 MBD3L4A6NDZ8 208 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 MBD3L3A6NE82 208 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 MBD3L5A6NJ08 208 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 FAM20BO75063 409 aa23.09■■□□□ 1.29
TOMM40-202ENST00000405636 SS18L1O75177 396 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 MRPL33O75394 65 aaKnown RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 PTGER4P35408 488 aa23.09■■□□□ 1.29
TOMM40-202ENST00000405636 MRPL49Q13405 166 aaKnown RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 CNEP1R1Q8N9A8 125 aa23.09■■□□□ 1.29
TOMM40-202ENST00000405636 MBD3L2Q8NHZ7 208 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 KISS1RQ969F8 398 aaPredicted RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 NMD3Q96D46 503 aaKnown RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 ALG12Q9BV10 488 aa23.09■■□□□ 1.29
TOMM40-202ENST00000405636 POLEQ07864 2286 aa23.09■■□□□ 1.29
TOMM40-202ENST00000405636 INTS1Q8N201 2190 aaKnown RBP23.09■■□□□ 1.29
TOMM40-202ENST00000405636 AKAP8O43823 692 aaKnown RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 SLC25A1P53007 311 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 ZNF91Q05481 1191 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 C20orf196Q8IYI0 205 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 PROKR2Q8NFJ6 384 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 OR6K6Q8NGW6 343 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 HTRA1Q92743 480 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 TMEM54Q969K7 222 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 ZMYND19Q96E35 227 aaPredicted RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 ALKBH3Q96Q83 286 aaPredicted RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 TM9SF2Q99805 663 aa23.08■■□□□ 1.29
TOMM40-202ENST00000405636 H2AFY2Q9P0M6 372 aaPredicted RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 FOXD3Q9UJU5 478 aaPredicted RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 PHF3Q92576 2039 aaKnown RBP23.08■■□□□ 1.29
TOMM40-202ENST00000405636 EIF4E1BA6NMX2 242 aaKnown RBP23.08■■□□□ 1.28
TOMM40-202ENST00000405636 PRODHO43272 600 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 SLC43A1O75387 559 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 QDPRP09417 244 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 GLI4P10075 376 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 SF3B4Q15427 424 aaKnown RBP eCLIP23.08■■□□□ 1.285e-7■■■■□ 24.5
TOMM40-202ENST00000405636 GUSBP1Q15486 140 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 HIST3H3Q16695 136 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 MEDAGQ5VYS4 303 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 LRFN4Q6PJG9 635 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 MEPCEQ7L2J0 689 aaKnown RBP23.08■■□□□ 1.28
TOMM40-202ENST00000405636 LINGO2Q7L985 606 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 SHFQ7M4L6 423 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 MCHR2Q969V1 340 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 Q96MT0 163 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 SNX18Q96RF0 628 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 TTYH2Q9BSA4 534 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 GLTPQ9NZD2 209 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 B9D1Q9UPM9 204 aa23.08■■□□□ 1.28
TOMM40-202ENST00000405636 IGLV1-36A0A0B4J1U3 117 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 CENPAP49450 140 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 CHN2P52757 468 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 PER3P56645 1201 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 PIGFQ07326 219 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 TSPO2Q5TGU0 170 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 VWA1Q6PCB0 445 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 ZNF837Q96EG3 531 aaPredicted RBP23.07■■□□□ 1.28
TOMM40-202ENST00000405636 PAK1IP1Q9NWT1 392 aaPredicted RBP23.07■■□□□ 1.28
TOMM40-202ENST00000405636 OSGIN2Q9Y236 505 aa23.07■■□□□ 1.28
TOMM40-202ENST00000405636 TRGV8A0A0C4DH27 118 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 RPSAP08865 295 aaKnown RBP23.06■■□□□ 1.28
TOMM40-202ENST00000405636 DBTP11182 482 aaKnown RBP23.06■■□□□ 1.28
TOMM40-202ENST00000405636 GSTT1P30711 240 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 KIR2DL2P43627 348 aaPredicted RBP23.06■■□□□ 1.28
TOMM40-202ENST00000405636 TEKQ02763 1124 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 LINC01590Q5TEZ4 76 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 GID4Q8IVV7 300 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 OR2T4Q8NH00 348 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 SMAP2Q8WU79 429 aaPredicted RBP23.06■■□□□ 1.28
TOMM40-202ENST00000405636 APH1AQ96BI3 265 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 RBP7Q96R05 134 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 TEAD3Q99594 435 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 PRSS50Q9UI38 385 aa23.06■■□□□ 1.28
TOMM40-202ENST00000405636 COA3Q9Y2R0 106 aaPredicted RBP23.06■■□□□ 1.28
TOMM40-202ENST00000405636 TVP23AA6NH52 213 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 MRPL3P09001 348 aaKnown RBP23.05■■□□□ 1.28
TOMM40-202ENST00000405636 CRHBPP24387 322 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 HTR1FP30939 366 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 PMPCAQ10713 525 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 OR2A2Q6IF42 318 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 FAM214BQ7L5A3 538 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.05■■□□□ 1.28
TOMM40-202ENST00000405636 ZNF100Q8IYN0 542 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 ZNF511Q8NB15 262 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 RNFT2Q96EX2 444 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 ULBP2Q9BZM5 246 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 SLCO5A1Q9H2Y9 848 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 GP6Q9HCN6 339 aa23.05■■□□□ 1.28
TOMM40-202ENST00000405636 GLRX2Q9NS18 164 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 236.9 ms