RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CMAHPQ9Y471 501 aa13.25□□□□□ -0.29
TPM1-207ENST00000403994 LOC100653049A0A140TA62 436 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 MCIDASD6RGH6 385 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 SLC22A2O15244 555 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 DHHO43323 396 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 PIP5K1CO60331 668 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 KRT34O76011 436 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 BCL10O95999 233 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 IFNA14P01570 189 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 F13BP05160 661 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 ERCC1P07992 297 aaPredicted RBP13.24□□□□□ -0.29
TPM1-207ENST00000403994 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 APEHP13798 732 aaKnown RBP13.24□□□□□ -0.29
TPM1-207ENST00000403994 DAOP14920 347 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 GZMKP49863 264 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 CLRN1P58418 232 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 RPS23P62266 143 aaKnown RBP13.24□□□□□ -0.29
TPM1-207ENST00000403994 PIN1Q13526 163 aaPredicted RBP13.24□□□□□ -0.29
TPM1-207ENST00000403994 RAB39AQ14964 217 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 FXNQ16595 210 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 HIST3H3Q16695 136 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 MICU2Q8IYU8 434 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 POU5F2Q8N7G0 328 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 OR4K5Q8NGD3 323 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 ASB10Q8WXI3 467 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 SGTBQ96EQ0 304 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 SH3GL3Q99963 347 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 TPK1Q9H3S4 243 aa13.24□□□□□ -0.29
TPM1-207ENST00000403994 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 VSTM5A8MXK1 200 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 SYNGR3O43761 229 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 ENTPD5O75356 428 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 ADRA2AP08913 450 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 QDPRP09417 244 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 TSPAN19P0C672 248 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 FAM157CP0CG43 387 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 THRBP10828 461 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 GIFP27352 417 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 KDELR2P33947 212 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 AQP2P41181 271 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 DAP3P51398 398 aaKnown RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 GALK2Q01415 458 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 GKAP1Q5VSY0 366 aaPredicted RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 NEU4Q8WWR8 484 aaPredicted RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 TPD52L3Q96J77 140 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 PRRC1Q96M27 445 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 ZNF347Q96SE7 839 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 SYT3Q9BQG1 590 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 MRPL13Q9BYD1 178 aaKnown RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 INIPQ9NRY2 104 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 MYEF2Q9P2K5 600 aaKnown RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 GMPR2Q9P2T1 348 aaKnown RBP13.23□□□□□ -0.29
TPM1-207ENST00000403994 SLC7A8Q9UHI5 535 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 SPEF1Q9Y4P9 236 aa13.23□□□□□ -0.29
TPM1-207ENST00000403994 ELOVL7A1L3X0 281 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 M0R233 179 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 FARS2O95363 451 aaKnown RBP13.22□□□□□ -0.29
TPM1-207ENST00000403994 STAMBPO95630 424 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 SERPINA5P05154 406 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 ZNF23P17027 643 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 FUT1P19526 365 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 IGFBP5P24593 272 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 LSP1P33241 339 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 GLRXP35754 106 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 EVX1P49640 407 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 MYBPC1Q00872 1141 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 NRN1LQ496H8 165 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 IQCCQ4KMZ1 466 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 FAM166AQ6J272 317 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 ARPINQ7Z6K5 226 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 SYT14Q8NB59 555 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 ZNF540Q8NDQ6 660 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 SLC30A7Q8NEW0 376 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 MOSPD2Q8NHP6 518 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 LIPHQ8WWY8 451 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 MCHR2Q969V1 340 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 MSI2Q96DH6 328 aaKnown RBP13.22□□□□□ -0.29
TPM1-207ENST00000403994 FZR1Q9UM11 496 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 MED31Q9Y3C7 131 aa13.22□□□□□ -0.29
TPM1-207ENST00000403994 LOC100289279A0A1B0GTE1 492 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 NPIPB13A6NJU9 1138 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 NPIPB4C9JG80 1138 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 TRMUO75648 421 aaKnown RBP13.21□□□□□ -0.29
TPM1-207ENST00000403994 SLC2A10O95528 541 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 IFNA2P01563 188 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 FUT4P22083 530 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 ALDH3B1P43353 468 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.29
TPM1-207ENST00000403994 MAD2L1BPQ15013 274 aaPredicted RBP13.21□□□□□ -0.29
TPM1-207ENST00000403994 C10orf128Q5T292 105 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 ARMC4Q5T2S8 1044 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
TPM1-207ENST00000403994 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms