RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RSPO1Q2MKA7 263 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 PPM1LQ5SGD2 360 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 RAET1LQ5VY80 246 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF530Q6P9A1 599 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 NCCRP1Q6ZVX7 275 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 OFCC1Q8IZS5 231 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 Q8N7P7 452 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 BBOF1Q8ND07 529 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 FBXL13Q8NEE6 735 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF502Q8TBZ5 544 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACMSDQ8TDX5 336 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 RNF138Q8WVD3 245 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 GEMIN6Q8WXD5 167 aaKnown RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 STMN2Q93045 179 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 IL22RA2Q969J5 263 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 NRTNQ99748 197 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 RPF2Q9H7B2 306 aaKnown RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 TMEM185BQ9H7F4 350 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 CRLF2Q9HC73 371 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 NEK6Q9HC98 313 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 EXD2Q9NVH0 621 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 GNPTGQ9UJJ9 305 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 N6AMT1Q9Y5N5 214 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 TTC41PQ6P2S7 1318 aa2.59□□□□□ -2
HMGB1P17-201ENST00000403495 PDS5BQ9NTI5 1447 aa2.59□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF816-ZNF321PA0A0X1KG74 233 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SERTM2A0A1B0GWG4 89 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 WI2-2373I1.2A0A1W2PRP0 233 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 LRRIQ3A6PVS8 624 aaPredicted RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 TCP11X1B4DZS4 312 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SPECC1L-ADORA2AF8WAN1 911 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 H0Y9J4 135 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 H0YIV9 168 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 CD5LO43866 347 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 CACNG3O60359 315 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 EIF3GO75821 320 aaKnown RBP eCLIP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 CLPXO76031 633 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 UTS2O95399 124 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 GZMAP12544 262 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF30P17039 623 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 DRD3P35462 400 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SLC26A3P40879 764 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SYKP43405 635 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 LHX2P50458 406 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 NUTF2P61970 127 aaKnown RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SELENBP1Q13228 472 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ILKQ13418 452 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 VAX1Q5SQQ9 334 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 C1orf185Q5T7R7 199 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 SPECC1LQ69YQ0 1117 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 MMAAQ8IVH4 418 aaKnown RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 PDIK1LQ8N165 341 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ARIH2OSQ8N7S6 290 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 CEP112Q8N8E3 955 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 OR1N2Q8NGR9 330 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 OR2G3Q8NGZ4 309 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 RHEBL1Q8TAI7 183 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 FAM81AQ8TBF8 368 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 DUS3LQ96G46 650 aaKnown RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 C20orf24Q9BUV8 137 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 RANBP3Q9H6Z4 567 aaPredicted RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 BEX1Q9HBH7 125 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 KCNJ16Q9NPI9 418 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ADAM22Q9P0K1 906 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 GCNT4Q9P109 453 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 NYAP2Q9P242 653 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 PCYOX1Q9UHG3 505 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 ING4Q9UNL4 249 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 MRPS18BQ9Y676 258 aaKnown RBP2.58□□□□□ -2
HMGB1P17-201ENST00000403495 MAP3K15Q6ZN16 1313 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 CEMIPQ8WUJ3 1361 aa2.58□□□□□ -2
HMGB1P17-201ENST00000403495 IGKV6D-41A0A0C4DH26 115 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 A0A1B0GUA9 196 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 NCF1BA6NI72 391 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 FAM166BA8MTA8 275 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 NCF1CA8MVU1 366 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 C9JVG2 144 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 C11orf94C9JXX5 98 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 AIM2O14862 343 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 KMOO15229 486 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 DPM1O60762 260 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 CDH16O75309 829 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 H6PDO95479 791 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 KRT6AP02538 564 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 SERPINA5P05154 406 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PCCAP05165 728 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 FGF4P08620 206 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 TDGF1P13385 188 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ANXA8P13928 327 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 HPGDP15428 266 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 ZNF250P15622 560 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 CRISP2P16562 243 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 DCKP27707 260 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 NAA10P41227 235 aaPredicted RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 TFPI2P48307 235 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 CCR8P51685 355 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 TDGF1P3P51864 188 aa2.57□□□□□ -2
HMGB1P17-201ENST00000403495 RPS15P62841 145 aaKnown RBP2.57□□□□□ -2
HMGB1P17-201ENST00000403495 PAX5Q02548 391 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms